Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:61357620-61458839

23 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dp(11Cops3-Rnf112)1Jrl	11	59817795 to 61454131	1636336		chromosomal duplication	duplication, Chr 11, James R Lupski 1
Del(11Cops3-Rnf112)1Jrl	11	59817795 to 61454131	1636336		complex/cluster/region	deletion, Chr 11, James R Lupski 1
Slc47a1	11	61343401 to 61378345	34944	-	protein coding gene	solute carrier family 47, member 1
Tssr108344	11	61365045 to 61365050	5	-	TSS region	transcription start site region 108344
Tssr108345	11	61366603 to 61366614	11	-	TSS region	transcription start site region 108345
Tssr108346	11	61366688 to 61366713	25	-	TSS region	transcription start site region 108346
Cpgi3008	11	61377771 to 61378424	653		CpG island	CpG island 3008
Tssr108347	11	61378052 to 61378085	33	-	TSS region	transcription start site region 108347
Tssr108348	11	61378089 to 61378092	3	-	TSS region	transcription start site region 108348
Tssr108349	11	61378103 to 61378108	5	-	TSS region	transcription start site region 108349
Tssr108350	11	61378306 to 61378347	41	-	TSS region	transcription start site region 108350
Gm42081	11	61391128 to 61397803	6675	-	lncRNA gene	predicted gene, 42081
Cpgi3009	11	61407620 to 61408839	1219		CpG island	CpG island 3009
n-TWcca5	11	61407916 to 61407987	71	-	tRNA gene	nuclear encoded tRNA trytophan 5 (anticodon CCA)
Gm45605	11	61408018 to 61412286	4268	+	lincRNA gene	predicted gene 45605
Gm12271	11	61416402 to 61416815	413	-	pseudogene	predicted gene 12271
D11Mit317	11	61429688 to 61429806	118		DNA segment	DNA Segment, Chr 11, Massachusetts Institute of Technology 317
Rnf112	11	61448442 to 61454131	5689	-	protein coding gene	ring finger protein 112
Tssr108351	11	61453516 to 61453553	37	-	TSS region	transcription start site region 108351
Tssr108352	11	61453857 to 61453866	9	-	TSS region	transcription start site region 108352
Tssr108353	11	61453890 to 61453910	20	-	TSS region	transcription start site region 108353
Tssr108354	11	61453921 to 61453982	61	-	TSS region	transcription start site region 108354
Tssr108355	11	61453992 to 61454019	27	-	TSS region	transcription start site region 108355