Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:60787837-60887866

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smcr8 11 60777525 to 60788287 10762 + protein coding gene Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
Shmt1 11 60788886 to 60811265 22379 - protein coding gene serine hydroxymethyltransferase 1 (soluble)
1110055C04Rik 11 60796305 to 60797240 935 unclassified gene RIKEN cDNA 1110055C04 gene
Gm24945 11 60804578 to 60804703 125 + snoRNA gene predicted gene, 24945
Tssr108307 11 60808819 to 60808830 11 - TSS region transcription start site region 108307
Tssr108308 11 60808843 to 60808875 32 - TSS region transcription start site region 108308
Cpgi2996 11 60810890 to 60811383 493 CpG island CpG island 2996
Tssr108309 11 60811024 to 60811027 3 - TSS region transcription start site region 108309
Tssr108310 11 60811105 to 60811210 105 - TSS region transcription start site region 108310
Tssr108311 11 60811228 to 60811241 13 - TSS region transcription start site region 108311
Tssr108312 11 60811255 to 60811270 15 - TSS region transcription start site region 108312
Gm12611 11 60816375 to 60817747 1372 + pseudogene predicted gene 12611
Gm12618 11 60818796 to 60819278 482 - pseudogene predicted gene 12618
Tssr108313 11 60819316 to 60819317 1 - TSS region transcription start site region 108313
Cpgi2997 11 60830518 to 60831108 590 CpG island CpG island 2997
Dhrs7b 11 60830631 to 60858423 27792 + protein coding gene dehydrogenase/reductase (SDR family) member 7B
Tssr101923 11 60830658 to 60830686 28 + TSS region transcription start site region 101923
Tssr101924 11 60830690 to 60830730 40 + TSS region transcription start site region 101924
Tssr101925 11 60837837 to 60837866 29 + TSS region transcription start site region 101925
Tmem11 11 60864452 to 60879038 14586 - protein coding gene transmembrane protein 11
Cpgi2998 11 60878000 to 60879392 1392 CpG island CpG island 2998
Tssr101926 11 60878191 to 60878196 5 + TSS region transcription start site region 101926
Tssr101927 11 60878361 to 60878375 14 + TSS region transcription start site region 101927
Tssr108314 11 60878764 to 60878812 48 - TSS region transcription start site region 108314
Tssr101928 11 60878944 to 60878999 55 + TSS region transcription start site region 101928
Tssr108315 11 60879406 to 60879426 20 - TSS region transcription start site region 108315
Gm26534 11 60884200 to 60886385 2185 + lincRNA gene predicted gene, 26534