Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:60725058-60792365

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Flii 11 60714143 to 60727263 13120 - protein coding gene flightless I actin binding protein
Cpgi2993 11 60726580 to 60727913 1333 CpG island CpG island 2993
Tssr108299 11 60727196 to 60727251 55 - TSS region transcription start site region 108299
Tssr108300 11 60727252 to 60727255 3 - TSS region transcription start site region 108300
Tssr108301 11 60727257 to 60727268 11 - TSS region transcription start site region 108301
Tssr108302 11 60727270 to 60727271 1 - TSS region transcription start site region 108302
Cpgi2994 11 60728003 to 60728806 803 CpG island CpG island 2994
Mief2 11 60728398 to 60732951 4553 + protein coding gene mitochondrial elongation factor 2
Tssr101913 11 60728413 to 60728454 41 + TSS region transcription start site region 101913
Tssr101914 11 60728481 to 60728502 21 + TSS region transcription start site region 101914
Mir5100 11 60728663 to 60728726 63 + miRNA gene microRNA 5100
Gm23341 11 60735861 to 60735957 96 + snRNA gene predicted gene, 23341
Top3a 11 60740058 to 60777365 37307 - protein coding gene topoisomerase (DNA) III alpha
Gm3881 11 60765842 to 60769793 3951 unclassified gene predicted gene 3881
Tssr101915 11 60775107 to 60775156 49 + TSS region transcription start site region 101915
Tssr101916 11 60775180 to 60775205 25 + TSS region transcription start site region 101916
Cpgi2995 11 60776680 to 60777982 1302 CpG island CpG island 2995
Tssr101917 11 60776872 to 60776890 18 + TSS region transcription start site region 101917
Tssr101918 11 60776907 to 60776948 41 + TSS region transcription start site region 101918
Tssr108303 11 60777214 to 60777225 11 - TSS region transcription start site region 108303
Tssr108304 11 60777226 to 60777239 13 - TSS region transcription start site region 108304
Tssr108305 11 60777241 to 60777284 43 - TSS region transcription start site region 108305
Tssr108306 11 60777435 to 60777460 25 - TSS region transcription start site region 108306
Smcr8 11 60777525 to 60788287 10762 + protein coding gene Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
Tssr101919 11 60777531 to 60777563 32 + TSS region transcription start site region 101919
Tssr101920 11 60777575 to 60777589 14 + TSS region transcription start site region 101920
Tssr101921 11 60778904 to 60778943 39 + TSS region transcription start site region 101921
Tssr101922 11 60786138 to 60786145 7 + TSS region transcription start site region 101922
Shmt1 11 60788886 to 60811265 22379 - protein coding gene serine hydroxymethyltransferase 1 (soluble)