MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:60704143-60737263

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Llgl1	11	60699723 to 60714186	14463	+	protein coding gene	LLGL1 scribble cell polarity complex component
Tssr101910	11	60704680 to 60704716	36	+	TSS region	transcription start site region 101910
Tssr101911	11	60706747 to 60706756	9	+	TSS region	transcription start site region 101911
Tssr101912	11	60707271 to 60707287	16	+	TSS region	transcription start site region 101912
Flii	11	60714143 to 60727263	13120	-	protein coding gene	flightless I actin binding protein
Tssr108297	11	60722651 to 60722678	27	-	TSS region	transcription start site region 108297
Tssr108298	11	60723413 to 60723434	21	-	TSS region	transcription start site region 108298
Cpgi2993	11	60726580 to 60727913	1333		CpG island	CpG island 2993
Tssr108299	11	60727196 to 60727251	55	-	TSS region	transcription start site region 108299
Tssr108300	11	60727252 to 60727255	3	-	TSS region	transcription start site region 108300
Tssr108301	11	60727257 to 60727268	11	-	TSS region	transcription start site region 108301
Tssr108302	11	60727270 to 60727271	1	-	TSS region	transcription start site region 108302
Cpgi2994	11	60728003 to 60728806	803		CpG island	CpG island 2994
Mief2	11	60728398 to 60732951	4553	+	protein coding gene	mitochondrial elongation factor 2
Tssr101913	11	60728413 to 60728454	41	+	TSS region	transcription start site region 101913
Tssr101914	11	60728481 to 60728502	21	+	TSS region	transcription start site region 101914
Mir5100	11	60728663 to 60728726	63	+	miRNA gene	microRNA 5100
Gm23341	11	60735861 to 60735957	96	+	snRNA gene	predicted gene, 23341