Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:60674723-60739186

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12616 11 60679707 to 60680088 381 - pseudogene predicted gene 12616
Gm12620 11 60682179 to 60684164 1985 - pseudogene predicted gene 12620
Gm12617 11 60692695 to 60693075 380 - pseudogene predicted gene 12617
Tssr108296 11 60695875 to 60695890 15 - TSS region transcription start site region 108296
Cpgi2992 11 60699489 to 60700375 886 CpG island CpG island 2992
Tssr101906 11 60699684 to 60699710 26 + TSS region transcription start site region 101906
Tssr101907 11 60699718 to 60699750 32 + TSS region transcription start site region 101907
Llgl1 11 60699723 to 60714186 14463 + protein coding gene LLGL1 scribble cell polarity complex component
Tssr101908 11 60699758 to 60699845 87 + TSS region transcription start site region 101908
Tssr101909 11 60699850 to 60699897 47 + TSS region transcription start site region 101909
D11Jpk2 11 60703140 to 60703255 115 DNA segment DNA segment, Chr 11, Japan, Kominami 2
Tssr3514 11 60704110 to 60704111 1 + TSS region transcription start site region 3514
Tssr101910 11 60704680 to 60704716 36 + TSS region transcription start site region 101910
Tssr101911 11 60706747 to 60706756 9 + TSS region transcription start site region 101911
Tssr101912 11 60707271 to 60707287 16 + TSS region transcription start site region 101912
Flii 11 60714143 to 60727263 13120 - protein coding gene flightless I actin binding protein
Tssr108297 11 60722651 to 60722678 27 - TSS region transcription start site region 108297
Tssr108298 11 60723413 to 60723434 21 - TSS region transcription start site region 108298
Cpgi2993 11 60726580 to 60727913 1333 CpG island CpG island 2993
Tssr108299 11 60727196 to 60727251 55 - TSS region transcription start site region 108299
Tssr108300 11 60727252 to 60727255 3 - TSS region transcription start site region 108300
Tssr108301 11 60727257 to 60727268 11 - TSS region transcription start site region 108301
Tssr108302 11 60727270 to 60727271 1 - TSS region transcription start site region 108302
Cpgi2994 11 60728003 to 60728806 803 CpG island CpG island 2994
Mief2 11 60728398 to 60732951 4553 + protein coding gene mitochondrial elongation factor 2
Tssr101913 11 60728413 to 60728454 41 + TSS region transcription start site region 101913
Tssr101914 11 60728481 to 60728502 21 + TSS region transcription start site region 101914
Mir5100 11 60728663 to 60728726 63 + miRNA gene microRNA 5100
Gm23341 11 60735861 to 60735957 96 + snRNA gene predicted gene, 23341