Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:6065691-6240415

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Camk2b 11 5969642 to 6066125 96483 - protein coding gene calcium/calmodulin-dependent protein kinase II, beta
Cpgi2551 11 6064535 to 6066517 1982 CpG island CpG island 2551
Tssr106685 11 6065697 to 6065728 31 - TSS region transcription start site region 106685
Tssr106686 11 6065737 to 6065755 18 - TSS region transcription start site region 106686
Tssr106687 11 6065768 to 6065779 11 - TSS region transcription start site region 106687
Tssr106688 11 6065890 to 6065911 21 - TSS region transcription start site region 106688
Tssr106689 11 6066110 to 6066120 10 - TSS region transcription start site region 106689
Tssr106690 11 6066121 to 6066137 16 - TSS region transcription start site region 106690
Tssr106691 11 6066354 to 6066365 11 - TSS region transcription start site region 106691
Tssr106692 11 6066371 to 6066384 13 - TSS region transcription start site region 106692
Tssr106693 11 6066396 to 6066411 15 - TSS region transcription start site region 106693
Cpgi2552 11 6068271 to 6068460 189 CpG island CpG island 2552
Gm46269 11 6084679 to 6088719 4040 - lncRNA gene predicted gene, 46269
Nudcd3 11 6105691 to 6200415 94724 - protein coding gene NudC domain containing 3
Tssr106694 11 6159861 to 6159885 24 - TSS region transcription start site region 106694
Rps15a-ps6 11 6172644 to 6173036 392 - pseudogene ribosomal protein S15A, pseudogene 6
Tssr106695 11 6173064 to 6173066 2 - TSS region transcription start site region 106695
Gm11969 11 6182679 to 6183034 355 - pseudogene predicted gene 11969
Cpgi2553 11 6199647 to 6200530 883 CpG island CpG island 2553
Tssr106696 11 6199993 to 6200045 52 - TSS region transcription start site region 106696
A730071L15Rik 11 6200029 to 6201643 1614 + protein coding gene RIKEN cDNA A730071L15Rik gene
Tssr106697 11 6200145 to 6200210 65 - TSS region transcription start site region 106697
Tssr106698 11 6200411 to 6200446 35 - TSS region transcription start site region 106698
Npc1l1 11 6211013 to 6230143 19130 - protein coding gene NPC1 like intracellular cholesterol transporter 1
Tssr106699 11 6213743 to 6213752 9 - TSS region transcription start site region 106699
Tssr106700 11 6213873 to 6213914 41 - TSS region transcription start site region 106700
Tssr106701 11 6222239 to 6222283 44 - TSS region transcription start site region 106701
Tssr106702 11 6228413 to 6228449 36 - TSS region transcription start site region 106702
Tssr106703 11 6229083 to 6229102 19 - TSS region transcription start site region 106703
Tssr106704 11 6229261 to 6229272 11 - TSS region transcription start site region 106704
Tssr106705 11 6230127 to 6230160 33 - TSS region transcription start site region 106705
Tssr106706 11 6230174 to 6230242 68 - TSS region transcription start site region 106706
Tssr100218 11 6230329 to 6230339 10 + TSS region transcription start site region 100218