Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:60175550-60265632

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rai1 11 60105013 to 60199197 94184 + protein coding gene retinoic acid induced 1
Cpgi2978 11 60175339 to 60177557 2218 CpG island CpG island 2978
Tssr101880 11 60175857 to 60175887 30 + TSS region transcription start site region 101880
Tssr108276 11 60176613 to 60176660 47 - TSS region transcription start site region 108276
Srebf1 11 60199089 to 60222581 23492 - protein coding gene sterol regulatory element binding transcription factor 1
Tssr108277 11 60199419 to 60199453 34 - TSS region transcription start site region 108277
Cpgi2979 11 60199823 to 60200175 352 CpG island CpG island 2979
Mir6921 11 60200538 to 60200617 79 - miRNA gene microRNA 6921
Mir6922 11 60202262 to 60202327 65 - miRNA gene microRNA 6922
Cpgi2980 11 60210010 to 60211136 1126 CpG island CpG island 2980
Tssr108278 11 60210410 to 60210428 18 - TSS region transcription start site region 108278
Cpgi2981 11 60220234 to 60220894 660 CpG island CpG island 2981
Tssr108279 11 60220537 to 60220548 11 - TSS region transcription start site region 108279
Tssr108280 11 60220550 to 60220632 82 - TSS region transcription start site region 108280
Cpgi2982 11 60222526 to 60223243 717 CpG island CpG island 2982
Tssr108281 11 60222756 to 60222774 18 - TSS region transcription start site region 108281
Tssr108282 11 60222832 to 60222852 20 - TSS region transcription start site region 108282
Tssr108283 11 60222854 to 60222872 18 - TSS region transcription start site region 108283
Tom1l2 11 60226714 to 60352905 126191 - protein coding gene target of myb1-like 2 (chicken)
Tssr108284 11 60229766 to 60229780 14 - TSS region transcription start site region 108284
Tssr108285 11 60239725 to 60239742 17 - TSS region transcription start site region 108285
Tssr108286 11 60239979 to 60240002 23 - TSS region transcription start site region 108286
Tssr101881 11 60240727 to 60240739 12 + TSS region transcription start site region 101881
Gm12265 11 60240810 to 60241930 1120 + antisense lncRNA gene predicted gene 12265
Gm38501 11 60254661 to 60258543 3882 - lncRNA gene predicted gene, 38501
Tssr108287 11 60263382 to 60263393 11 - TSS region transcription start site region 108287