Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Ity2a | 11 | 22634137 | QTL | immunity to S. typhimurium 2a | ||
Del(11Cops3-Rnf112)1Jrl | 11 | 1636336 | complex/cluster/region | deletion, Chr 11, James R Lupski 1 | ||
Del(11Cops3-Gid4)3Jrl | 11 | 627482 | cytogenetic marker | deletion, Chr 11, James R Lupski 3 | ||
Del(11Cops3-Gid4)4Jrl | 11 | 627482 | complex/cluster/region | deletion, Chr 11, James R Lupski 4 | ||
Dp(11Cops3-Rnf112)1Jrl | 11 | 1636336 | chromosomal duplication | duplication, Chr 11, James R Lupski 1 | ||
Pemt | 11 | 75875 | - | protein coding gene | phosphatidylethanolamine N-methyltransferase | |
Tssr108265 | 11 | 9 | - | TSS region | transcription start site region 108265 | |
Tssr108266 | 11 | 22 | - | TSS region | transcription start site region 108266 | |
Tssr108267 | 11 | 17 | - | TSS region | transcription start site region 108267 | |
Tssr108268 | 11 | 12 | - | TSS region | transcription start site region 108268 | |
Tssr108269 | 11 | 51 | - | TSS region | transcription start site region 108269 | |
Tssr108270 | 11 | 75 | - | TSS region | transcription start site region 108270 | |
Cpgi2973 | 11 | 529 | CpG island | CpG island 2973 | ||
Tssr108271 | 11 | 54 | - | TSS region | transcription start site region 108271 | |
Tssr101872 | 11 | 1 | + | TSS region | transcription start site region 101872 | |
Cpgi2974 | 11 | 177 | CpG island | CpG island 2974 | ||
Gm27511 | 11 | 126 | + | unclassified non-coding RNA gene | predicted gene, 27511 | |
Tssr108272 | 11 | 20 | - | TSS region | transcription start site region 108272 | |
Tssr108273 | 11 | 20 | - | TSS region | transcription start site region 108273 | |
Cpgi2975 | 11 | 2321 | CpG island | CpG island 2975 | ||
Tssr101873 | 11 | 51 | + | TSS region | transcription start site region 101873 | |
Tssr101874 | 11 | 42 | + | TSS region | transcription start site region 101874 | |
Rai1 | 11 | 94184 | + | protein coding gene | retinoic acid induced 1 | |
Tssr101875 | 11 | 20 | + | TSS region | transcription start site region 101875 | |
Tssr101876 | 11 | 26 | + | TSS region | transcription start site region 101876 | |
Tssr101877 | 11 | 18 | + | TSS region | transcription start site region 101877 | |
Tssr108274 | 11 | 22 | - | TSS region | transcription start site region 108274 | |
4930412M03Rik | 11 | 3011 | - | lincRNA gene | RIKEN cDNA 4930412M03 gene | |
Cpgi2976 | 11 | 789 | CpG island | CpG island 2976 | ||
Tssr108275 | 11 | 11 | - | TSS region | transcription start site region 108275 | |
Cpgi2977 | 11 | 1716 | CpG island | CpG island 2977 | ||
Tssr101878 | 11 | 68 | + | TSS region | transcription start site region 101878 | |
Tssr101879 | 11 | 14 | + | TSS region | transcription start site region 101879 | |
Cpgi2978 | 11 | 2218 | CpG island | CpG island 2978 | ||
Tssr101880 | 11 | 30 | + | TSS region | transcription start site region 101880 | |
Tssr108276 | 11 | 47 | - | TSS region | transcription start site region 108276 | |
Srebf1 | 11 | 23492 | - | protein coding gene | sterol regulatory element binding transcription factor 1 | |
Tssr108277 | 11 | 34 | - | TSS region | transcription start site region 108277 | |
Cpgi2979 | 11 | 352 | CpG island | CpG island 2979 | ||
Mir6921 | 11 | 79 | - | miRNA gene | microRNA 6921 | |
Mir6922 | 11 | 65 | - | miRNA gene | microRNA 6922 | |
Cpgi2980 | 11 | 1126 | CpG island | CpG island 2980 | ||
Tssr108278 | 11 | 18 | - | TSS region | transcription start site region 108278 | |
Cpgi2981 | 11 | 660 | CpG island | CpG island 2981 | ||
Tssr108279 | 11 | 11 | - | TSS region | transcription start site region 108279 | |
Tssr108280 | 11 | 82 | - | TSS region | transcription start site region 108280 | |
Cpgi2982 | 11 | 717 | CpG island | CpG island 2982 | ||
Tssr108281 | 11 | 18 | - | TSS region | transcription start site region 108281 | |
Tssr108282 | 11 | 20 | - | TSS region | transcription start site region 108282 | |
Tssr108283 | 11 | 18 | - | TSS region | transcription start site region 108283 | |
Tom1l2 | 11 | 126191 | - | protein coding gene | target of myb1-like 2 (chicken) | |
Tssr108284 | 11 | 14 | - | TSS region | transcription start site region 108284 | |
Tssr108285 | 11 | 17 | - | TSS region | transcription start site region 108285 | |
Tssr108286 | 11 | 23 | - | TSS region | transcription start site region 108286 | |
Tssr101881 | 11 | 12 | + | TSS region | transcription start site region 101881 | |
Gm12265 | 11 | 1120 | + | antisense lncRNA gene | predicted gene 12265 | |
Gm38501 | 11 | 3882 | - | lncRNA gene | predicted gene, 38501 | |
Tssr108287 | 11 | 11 | - | TSS region | transcription start site region 108287 | |
Tssr108288 | 11 | 34 | - | TSS region | transcription start site region 108288 | |
Gm27711 | 11 | 117 | - | miRNA gene | predicted gene, 27711 | |
Gm12266 | 11 | 961 | + | pseudogene | predicted gene 12266 | |
Cpgi2983 | 11 | 901 | CpG island | CpG island 2983 | ||
Tssr108289 | 11 | 27 | - | TSS region | transcription start site region 108289 | |
Tssr108290 | 11 | 5 | - | TSS region | transcription start site region 108290 | |
Tssr101882 | 11 | 14 | + | TSS region | transcription start site region 101882 | |
Tssr101883 | 11 | 84 | + | TSS region | transcription start site region 101883 | |
Drc3 | 11 | 41012 | + | protein coding gene | dynein regulatory complex subunit 3 | |
Tssr101884 | 11 | 23 | + | TSS region | transcription start site region 101884 | |
Atpaf2 | 11 | 17831 | - | protein coding gene | ATP synthase mitochondrial F1 complex assembly factor 2 | |
Cpgi2984 | 11 | 1649 | CpG island | CpG island 2984 | ||
Tssr108291 | 11 | 34 | - | TSS region | transcription start site region 108291 | |
Tssr101885 | 11 | 5 | + | TSS region | transcription start site region 101885 | |
Gid4 | 11 | 28132 | + | protein coding gene | GID complex subunit 4, VID24 homolog | |
Tssr101886 | 11 | 29 | + | TSS region | transcription start site region 101886 | |
Tssr101887 | 11 | 7 | + | TSS region | transcription start site region 101887 | |
Tssr101888 | 11 | 63 | + | TSS region | transcription start site region 101888 | |
Tssr101889 | 11 | 26 | + | TSS region | transcription start site region 101889 | |
Tssr101890 | 11 | 58 | + | TSS region | transcription start site region 101890 | |
Tssr101891 | 11 | 18 | + | TSS region | transcription start site region 101891 | |
Tssr108292 | 11 | 42 | - | TSS region | transcription start site region 108292 | |
Tssr108293 | 11 | 26 | - | TSS region | transcription start site region 108293 | |
Tssr101892 | 11 | 5 | + | TSS region | transcription start site region 101892 | |
Gm12268 | 11 | 441 | + | pseudogene | predicted gene 12268 | |
Gm12267 | 11 | 760 | - | pseudogene | predicted gene 12267 | |
Cpgi2985 | 11 | 633 | CpG island | CpG island 2985 | ||
Tssr101893 | 11 | 70 | + | TSS region | transcription start site region 101893 | |
Drg2 | 11 | 14135 | + | protein coding gene | developmentally regulated GTP binding protein 2 | |
Tssr101894 | 11 | 15 | + | TSS region | transcription start site region 101894 | |
Myo15 | 11 | 59030 | + | protein coding gene | myosin XV | |
Tssr101895 | 11 | 15 | + | TSS region | transcription start site region 101895 | |
Cpgi2986 | 11 | 818 | CpG island | CpG island 2986 | ||
Cpgi2987 | 11 | 654 | CpG island | CpG island 2987 | ||
Cpgi2988 | 11 | 458 | CpG island | CpG island 2988 | ||
Cpgi2989 | 11 | 163 | CpG island | CpG island 2989 | ||
Cpgi2990 | 11 | 648 | CpG island | CpG island 2990 | ||
D11Mit26 | 11 | 190 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 26 | ||
Tssr101896 | 11 | 37 | + | TSS region | transcription start site region 101896 | |
Cpgi2991 | 11 | 2417 | CpG island | CpG island 2991 | ||
Tssr108294 | 11 | 20 | - | TSS region | transcription start site region 108294 | |
Tssr108295 | 11 | 30 | - | TSS region | transcription start site region 108295 | |
Tssr101897 | 11 | 77 | + | TSS region | transcription start site region 101897 | |
Alkbh5 | 11 | 20829 | + | protein coding gene | alkB homolog 5, RNA demethylase | |
Tssr101898 | 11 | 22 | + | TSS region | transcription start site region 101898 | |
Tssr101899 | 11 | 85 | + | TSS region | transcription start site region 101899 | |
Tssr101900 | 11 | 12 | + | TSS region | transcription start site region 101900 | |
Tssr101901 | 11 | 5 | + | TSS region | transcription start site region 101901 | |
Tssr101902 | 11 | 4 | + | TSS region | transcription start site region 101902 | |
Tssr101903 | 11 | 31 | + | TSS region | transcription start site region 101903 | |
Tssr101904 | 11 | 15 | + | TSS region | transcription start site region 101904 | |
Tssr101905 | 11 | 9 | + | TSS region | transcription start site region 101905 | |
Gm12622 | 11 | 381 | - | pseudogene | predicted gene 12622 | |
Gm12628 | 11 | 587 | - | pseudogene | predicted gene 12628 | |
Gm26837 | 11 | 59586 | + | lincRNA gene | predicted gene, 26837 | |
Gm12623 | 11 | 1982 | - | pseudogene | predicted gene 12623 | |
Gm42078 | 11 | 1178 | - | protein coding gene | predicted gene, 42078 | |
Gm46257 | 11 | 5332 | - | protein coding gene | predicted gene, 46257 | |
Gm12621 | 11 | 381 | - | pseudogene | predicted gene 12621 | |
Gm12627 | 11 | 381 | - | pseudogene | predicted gene 12627 | |
Gm12613 | 11 | 381 | - | pseudogene | predicted gene 12613 | |
Gm12614 | 11 | 381 | - | pseudogene | predicted gene 12614 | |
Gm12615 | 11 | 381 | - | pseudogene | predicted gene 12615 | |
Gm12626 | 11 | 1982 | - | pseudogene | predicted gene 12626 | |
Gm12625 | 11 | 381 | - | pseudogene | predicted gene 12625 | |
Gm12619 | 11 | 6787 | - | pseudogene | predicted gene 12619 | |
Gm12624 | 11 | 381 | - | pseudogene | predicted gene 12624 | |
Gm12612 | 11 | 1985 | - | pseudogene | predicted gene 12612 | |
Gm12616 | 11 | 381 | - | pseudogene | predicted gene 12616 | |
Gm12620 | 11 | 1985 | - | pseudogene | predicted gene 12620 | |
Gm12617 | 11 | 380 | - | pseudogene | predicted gene 12617 | |
Tssr108296 | 11 | 15 | - | TSS region | transcription start site region 108296 | |
Cpgi2992 | 11 | 886 | CpG island | CpG island 2992 | ||
Tssr101906 | 11 | 26 | + | TSS region | transcription start site region 101906 | |
Tssr101907 | 11 | 32 | + | TSS region | transcription start site region 101907 | |
Llgl1 | 11 | 14463 | + | protein coding gene | LLGL1 scribble cell polarity complex component | |
Tssr101908 | 11 | 87 | + | TSS region | transcription start site region 101908 | |
Tssr101909 | 11 | 47 | + | TSS region | transcription start site region 101909 | |
D11Jpk2 | 11 | 115 | DNA segment | DNA segment, Chr 11, Japan, Kominami 2 | ||
Tssr3514 | 11 | 1 | + | TSS region | transcription start site region 3514 | |
Tssr101910 | 11 | 36 | + | TSS region | transcription start site region 101910 | |
Tssr101911 | 11 | 9 | + | TSS region | transcription start site region 101911 | |
Tssr101912 | 11 | 16 | + | TSS region | transcription start site region 101912 | |
Flii | 11 | 13120 | - | protein coding gene | flightless I actin binding protein | |
Tssr108297 | 11 | 27 | - | TSS region | transcription start site region 108297 | |
Tssr108298 | 11 | 21 | - | TSS region | transcription start site region 108298 | |
Cpgi2993 | 11 | 1333 | CpG island | CpG island 2993 | ||
Tssr108299 | 11 | 55 | - | TSS region | transcription start site region 108299 | |
Tssr108300 | 11 | 3 | - | TSS region | transcription start site region 108300 | |
Tssr108301 | 11 | 11 | - | TSS region | transcription start site region 108301 | |
Tssr108302 | 11 | 1 | - | TSS region | transcription start site region 108302 | |
Cpgi2994 | 11 | 803 | CpG island | CpG island 2994 | ||
Mief2 | 11 | 4553 | + | protein coding gene | mitochondrial elongation factor 2 | |
Tssr101913 | 11 | 41 | + | TSS region | transcription start site region 101913 | |
Tssr101914 | 11 | 21 | + | TSS region | transcription start site region 101914 | |
Mir5100 | 11 | 63 | + | miRNA gene | microRNA 5100 | |
Gm23341 | 11 | 96 | + | snRNA gene | predicted gene, 23341 | |
Top3a | 11 | 37307 | - | protein coding gene | topoisomerase (DNA) III alpha | |
Gm3881 | 11 | 3951 | unclassified gene | predicted gene 3881 | ||
Tssr101915 | 11 | 49 | + | TSS region | transcription start site region 101915 | |
Tssr101916 | 11 | 25 | + | TSS region | transcription start site region 101916 | |
Cpgi2995 | 11 | 1302 | CpG island | CpG island 2995 | ||
Tssr101917 | 11 | 18 | + | TSS region | transcription start site region 101917 | |
Tssr101918 | 11 | 41 | + | TSS region | transcription start site region 101918 | |
Tssr108303 | 11 | 11 | - | TSS region | transcription start site region 108303 | |
Tssr108304 | 11 | 13 | - | TSS region | transcription start site region 108304 | |
Tssr108305 | 11 | 43 | - | TSS region | transcription start site region 108305 | |
Tssr108306 | 11 | 25 | - | TSS region | transcription start site region 108306 | |
Smcr8 | 11 | 10762 | + | protein coding gene | Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) | |
Tssr101919 | 11 | 32 | + | TSS region | transcription start site region 101919 | |
Tssr101920 | 11 | 14 | + | TSS region | transcription start site region 101920 | |
Tssr101921 | 11 | 39 | + | TSS region | transcription start site region 101921 | |
Tssr101922 | 11 | 7 | + | TSS region | transcription start site region 101922 | |
Shmt1 | 11 | 22379 | - | protein coding gene | serine hydroxymethyltransferase 1 (soluble) | |
1110055C04Rik | 11 | 935 | unclassified gene | RIKEN cDNA 1110055C04 gene | ||
Gm24945 | 11 | 125 | + | snoRNA gene | predicted gene, 24945 | |
Tssr108307 | 11 | 11 | - | TSS region | transcription start site region 108307 | |
Tssr108308 | 11 | 32 | - | TSS region | transcription start site region 108308 | |
Cpgi2996 | 11 | 493 | CpG island | CpG island 2996 | ||
Tssr108309 | 11 | 3 | - | TSS region | transcription start site region 108309 | |
Tssr108310 | 11 | 105 | - | TSS region | transcription start site region 108310 | |
Tssr108311 | 11 | 13 | - | TSS region | transcription start site region 108311 | |
Tssr108312 | 11 | 15 | - | TSS region | transcription start site region 108312 | |
Gm12611 | 11 | 1372 | + | pseudogene | predicted gene 12611 | |
Gm12618 | 11 | 482 | - | pseudogene | predicted gene 12618 | |
Tssr108313 | 11 | 1 | - | TSS region | transcription start site region 108313 | |
Cpgi2997 | 11 | 590 | CpG island | CpG island 2997 | ||
Dhrs7b | 11 | 27792 | + | protein coding gene | dehydrogenase/reductase (SDR family) member 7B | |
Tssr101923 | 11 | 28 | + | TSS region | transcription start site region 101923 | |
Tssr101924 | 11 | 40 | + | TSS region | transcription start site region 101924 | |
Tssr101925 | 11 | 29 | + | TSS region | transcription start site region 101925 | |
Tmem11 | 11 | 14586 | - | protein coding gene | transmembrane protein 11 | |
Cpgi2998 | 11 | 1392 | CpG island | CpG island 2998 | ||
Tssr101926 | 11 | 5 | + | TSS region | transcription start site region 101926 | |
Tssr101927 | 11 | 14 | + | TSS region | transcription start site region 101927 | |
Tssr108314 | 11 | 48 | - | TSS region | transcription start site region 108314 | |
Tssr101928 | 11 | 55 | + | TSS region | transcription start site region 101928 | |
Tssr108315 | 11 | 20 | - | TSS region | transcription start site region 108315 | |
Gm26534 | 11 | 2185 | + | lincRNA gene | predicted gene, 26534 | |
Cpgi2999 | 11 | 158 | CpG island | CpG island 2999 | ||
Natd1 | 11 | 11546 | - | protein coding gene | N-acetyltransferase domain containing 1 | |
Cpgi3000 | 11 | 1160 | CpG island | CpG island 3000 |