Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:59916863-60156914

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1810063I02Rik 11 59921499 to 59921889 390 + lincRNA gene RIKEN cDNA 1810063I02 gene
Med9os 11 59946889 to 59948142 1253 - antisense lncRNA gene mediator complex subunit 9, opposite strand
Cpgi2971 11 59947841 to 59948680 839 CpG island CpG island 2971
Tssr108257 11 59948079 to 59948101 22 - TSS region transcription start site region 108257
Tssr108258 11 59948107 to 59948163 56 - TSS region transcription start site region 108258
Tssr108259 11 59948175 to 59948181 6 - TSS region transcription start site region 108259
Med9 11 59948206 to 59962205 13999 + protein coding gene mediator complex subunit 9
Tssr101871 11 59948209 to 59948261 52 + TSS region transcription start site region 101871
Rasd1 11 59963181 to 59964944 1763 - protein coding gene RAS, dexamethasone-induced 1
Cpgi2972 11 59963686 to 59965496 1810 CpG island CpG island 2972
Tssr108260 11 59964911 to 59964922 11 - TSS region transcription start site region 108260
Tssr108261 11 59964936 to 59964951 15 - TSS region transcription start site region 108261
Pemt 11 59970614 to 60046489 75875 - protein coding gene phosphatidylethanolamine N-methyltransferase
Tssr108262 11 59976940 to 59976946 6 - TSS region transcription start site region 108262
Tssr108263 11 59983499 to 59983522 23 - TSS region transcription start site region 108263
Gm38498 11 60020769 to 60026954 6185 - lncRNA gene predicted gene, 38498
Tssr108264 11 60021218 to 60021231 13 - TSS region transcription start site region 108264
Tssr108265 11 60031828 to 60031837 9 - TSS region transcription start site region 108265
Tssr108266 11 60031847 to 60031869 22 - TSS region transcription start site region 108266
Tssr108267 11 60031874 to 60031891 17 - TSS region transcription start site region 108267
Tssr108268 11 60031902 to 60031914 12 - TSS region transcription start site region 108268
Tssr108269 11 60036863 to 60036914 51 - TSS region transcription start site region 108269
Tssr108270 11 60036917 to 60036992 75 - TSS region transcription start site region 108270
Cpgi2973 11 60046088 to 60046617 529 CpG island CpG island 2973
Tssr108271 11 60046478 to 60046532 54 - TSS region transcription start site region 108271
Tssr101872 11 60074433 to 60074434 1 + TSS region transcription start site region 101872
Cpgi2974 11 60088368 to 60088545 177 CpG island CpG island 2974
Gm27511 11 60099547 to 60099673 126 + unclassified non-coding RNA gene predicted gene, 27511
Tssr108272 11 60099973 to 60099993 20 - TSS region transcription start site region 108272
Tssr108273 11 60099999 to 60100019 20 - TSS region transcription start site region 108273
Cpgi2975 11 60104523 to 60106844 2321 CpG island CpG island 2975
Tssr101873 11 60104916 to 60104967 51 + TSS region transcription start site region 101873
Tssr101874 11 60104971 to 60105013 42 + TSS region transcription start site region 101874
Rai1 11 60105013 to 60199197 94184 + protein coding gene retinoic acid induced 1
Tssr101875 11 60105015 to 60105035 20 + TSS region transcription start site region 101875
Tssr101876 11 60105052 to 60105078 26 + TSS region transcription start site region 101876
Tssr101877 11 60105079 to 60105097 18 + TSS region transcription start site region 101877
Tssr108274 11 60106523 to 60106545 22 - TSS region transcription start site region 108274
4930412M03Rik 11 60112219 to 60115230 3011 - lincRNA gene RIKEN cDNA 4930412M03 gene
Cpgi2976 11 60114904 to 60115693 789 CpG island CpG island 2976
Tssr108275 11 60115226 to 60115237 11 - TSS region transcription start site region 108275
Cpgi2977 11 60139232 to 60140948 1716 CpG island CpG island 2977
Tssr101878 11 60139957 to 60140025 68 + TSS region transcription start site region 101878
Tssr101879 11 60140066 to 60140080 14 + TSS region transcription start site region 101879