Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:5984679-6188719

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Camk2b	11	5969642 to 6066125	96483	-	protein coding gene	calcium/calmodulin-dependent protein kinase II, beta
Tssr106675	11	5989658 to 5989670	12	-	TSS region	transcription start site region 106675
Tssr106676	11	6003179 to 6003191	12	-	TSS region	transcription start site region 106676
Tssr106677	11	6003202 to 6003218	16	-	TSS region	transcription start site region 106677
Gm40812	11	6006268 to 6010745	4477	+	lncRNA gene	predicted gene, 40812
Tssr106678	11	6008819 to 6008851	32	-	TSS region	transcription start site region 106678
Tssr106679	11	6018604 to 6018641	37	-	TSS region	transcription start site region 106679
Tssr106680	11	6029043 to 6029052	9	-	TSS region	transcription start site region 106680
Tssr106681	11	6029216 to 6029249	33	-	TSS region	transcription start site region 106681
Cpgi2550	11	6064073 to 6064428	355		CpG island	CpG island 2550
Cpgi2551	11	6064535 to 6066517	1982		CpG island	CpG island 2551
Tssr106682	11	6065539 to 6065635	96	-	TSS region	transcription start site region 106682
Tssr106683	11	6065637 to 6065663	26	-	TSS region	transcription start site region 106683
Tssr106684	11	6065671 to 6065688	17	-	TSS region	transcription start site region 106684
Tssr106685	11	6065697 to 6065728	31	-	TSS region	transcription start site region 106685
Tssr106686	11	6065737 to 6065755	18	-	TSS region	transcription start site region 106686
Tssr106687	11	6065768 to 6065779	11	-	TSS region	transcription start site region 106687
Tssr106688	11	6065890 to 6065911	21	-	TSS region	transcription start site region 106688
Tssr106689	11	6066110 to 6066120	10	-	TSS region	transcription start site region 106689
Tssr106690	11	6066121 to 6066137	16	-	TSS region	transcription start site region 106690
Tssr106691	11	6066354 to 6066365	11	-	TSS region	transcription start site region 106691
Tssr106692	11	6066371 to 6066384	13	-	TSS region	transcription start site region 106692
Tssr106693	11	6066396 to 6066411	15	-	TSS region	transcription start site region 106693
Cpgi2552	11	6068271 to 6068460	189		CpG island	CpG island 2552
Gm46269	11	6084679 to 6088719	4040	-	lncRNA gene	predicted gene, 46269
Nudcd3	11	6105691 to 6200415	94724	-	protein coding gene	NudC domain containing 3
Tssr106694	11	6159861 to 6159885	24	-	TSS region	transcription start site region 106694
Rps15a-ps6	11	6172644 to 6173036	392	-	pseudogene	ribosomal protein S15A, pseudogene 6
Tssr106695	11	6173064 to 6173066	2	-	TSS region	transcription start site region 106695
Gm11969	11	6182679 to 6183034	355	-	pseudogene	predicted gene 11969