Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Ity2a | 11 | 22634137 | QTL | immunity to S. typhimurium 2a | ||
Mprip | 11 | 118387 | + | protein coding gene | myosin phosphatase Rho interacting protein | |
Gm12264 | 11 | 5035 | - | antisense lncRNA gene | predicted gene 12264 | |
Pld6 | 11 | 3748 | - | protein coding gene | phospholipase D family, member 6 | |
Cpgi2967 | 11 | 823 | CpG island | CpG island 2967 | ||
Tssr108239 | 11 | 9 | - | TSS region | transcription start site region 108239 | |
Tssr108240 | 11 | 21 | - | TSS region | transcription start site region 108240 | |
Tssr108241 | 11 | 9 | - | TSS region | transcription start site region 108241 | |
Tssr108242 | 11 | 14 | - | TSS region | transcription start site region 108242 | |
Tssr108243 | 11 | 11 | - | TSS region | transcription start site region 108243 | |
Tssr108244 | 11 | 9 | - | TSS region | transcription start site region 108244 | |
Tssr108245 | 11 | 47 | - | TSS region | transcription start site region 108245 | |
Flcn | 11 | 18608 | - | protein coding gene | folliculin | |
Cpgi2968 | 11 | 791 | CpG island | CpG island 2968 | ||
Tssr108246 | 11 | 73 | - | TSS region | transcription start site region 108246 | |
Tssr108247 | 11 | 18 | - | TSS region | transcription start site region 108247 | |
Gm16062 | 11 | 8282 | + | antisense lncRNA gene | predicted gene 16062 | |
Tssr101863 | 11 | 26 | + | TSS region | transcription start site region 101863 | |
Tssr101864 | 11 | 12 | + | TSS region | transcription start site region 101864 | |
Tssr101865 | 11 | 25 | + | TSS region | transcription start site region 101865 | |
Gm24939 | 11 | 136 | + | rRNA gene | predicted gene, 24939 | |
Del(11Cops3-Gid4)4Jrl | 11 | 627482 | complex/cluster/region | deletion, Chr 11, James R Lupski 4 | ||
Cops3 | 11 | 22042 | - | protein coding gene | COP9 signalosome subunit 3 | |
Del(11Cops3-Rnf112)1Jrl | 11 | 1636336 | complex/cluster/region | deletion, Chr 11, James R Lupski 1 | ||
Del(11Cops3-Gid4)3Jrl | 11 | 627482 | cytogenetic marker | deletion, Chr 11, James R Lupski 3 | ||
Dp(11Cops3-Rnf112)1Jrl | 11 | 1636336 | chromosomal duplication | duplication, Chr 11, James R Lupski 1 | ||
Tssr108248 | 11 | 9 | - | TSS region | transcription start site region 108248 | |
Tssr108249 | 11 | 18 | - | TSS region | transcription start site region 108249 | |
Cpgi2969 | 11 | 857 | CpG island | CpG island 2969 | ||
Tssr108250 | 11 | 20 | - | TSS region | transcription start site region 108250 | |
Tssr108251 | 11 | 21 | - | TSS region | transcription start site region 108251 | |
Tssr101866 | 11 | 11 | + | TSS region | transcription start site region 101866 | |
Tssr108252 | 11 | 18 | - | TSS region | transcription start site region 108252 | |
Tssr108253 | 11 | 18 | - | TSS region | transcription start site region 108253 | |
Tssr108254 | 11 | 15 | - | TSS region | transcription start site region 108254 | |
Tssr108255 | 11 | 15 | - | TSS region | transcription start site region 108255 | |
Nt5m | 11 | 29027 | + | protein coding gene | 5',3'-nucleotidase, mitochondrial | |
Cpgi2970 | 11 | 911 | CpG island | CpG island 2970 | ||
Tssr101867 | 11 | 62 | + | TSS region | transcription start site region 101867 | |
Tssr101868 | 11 | 28 | + | TSS region | transcription start site region 101868 | |
Tssr108256 | 11 | 21 | - | TSS region | transcription start site region 108256 | |
Tssr101869 | 11 | 52 | + | TSS region | transcription start site region 101869 | |
Tssr101870 | 11 | 4 | + | TSS region | transcription start site region 101870 | |
Gm12714 | 11 | 8945 | + | lincRNA gene | predicted gene 12714 | |
1810063I02Rik | 11 | 390 | + | lincRNA gene | RIKEN cDNA 1810063I02 gene | |
Med9os | 11 | 1253 | - | antisense lncRNA gene | mediator complex subunit 9, opposite strand | |
Cpgi2971 | 11 | 839 | CpG island | CpG island 2971 | ||
Tssr108257 | 11 | 22 | - | TSS region | transcription start site region 108257 | |
Tssr108258 | 11 | 56 | - | TSS region | transcription start site region 108258 | |
Tssr108259 | 11 | 6 | - | TSS region | transcription start site region 108259 | |
Med9 | 11 | 13999 | + | protein coding gene | mediator complex subunit 9 | |
Tssr101871 | 11 | 52 | + | TSS region | transcription start site region 101871 | |
Rasd1 | 11 | 1763 | - | protein coding gene | RAS, dexamethasone-induced 1 | |
Cpgi2972 | 11 | 1810 | CpG island | CpG island 2972 | ||
Tssr108260 | 11 | 11 | - | TSS region | transcription start site region 108260 | |
Tssr108261 | 11 | 15 | - | TSS region | transcription start site region 108261 | |
Pemt | 11 | 75875 | - | protein coding gene | phosphatidylethanolamine N-methyltransferase | |
Tssr108262 | 11 | 6 | - | TSS region | transcription start site region 108262 | |
Tssr108263 | 11 | 23 | - | TSS region | transcription start site region 108263 | |
Gm38498 | 11 | 6185 | - | lncRNA gene | predicted gene, 38498 | |
Tssr108264 | 11 | 13 | - | TSS region | transcription start site region 108264 | |
Tssr108265 | 11 | 9 | - | TSS region | transcription start site region 108265 | |
Tssr108266 | 11 | 22 | - | TSS region | transcription start site region 108266 | |
Tssr108267 | 11 | 17 | - | TSS region | transcription start site region 108267 | |
Tssr108268 | 11 | 12 | - | TSS region | transcription start site region 108268 | |
Tssr108269 | 11 | 51 | - | TSS region | transcription start site region 108269 | |
Tssr108270 | 11 | 75 | - | TSS region | transcription start site region 108270 | |
Cpgi2973 | 11 | 529 | CpG island | CpG island 2973 | ||
Tssr108271 | 11 | 54 | - | TSS region | transcription start site region 108271 | |
Tssr101872 | 11 | 1 | + | TSS region | transcription start site region 101872 | |
Cpgi2974 | 11 | 177 | CpG island | CpG island 2974 | ||
Gm27511 | 11 | 126 | + | unclassified non-coding RNA gene | predicted gene, 27511 | |
Tssr108272 | 11 | 20 | - | TSS region | transcription start site region 108272 | |
Tssr108273 | 11 | 20 | - | TSS region | transcription start site region 108273 | |
Cpgi2975 | 11 | 2321 | CpG island | CpG island 2975 | ||
Tssr101873 | 11 | 51 | + | TSS region | transcription start site region 101873 | |
Tssr101874 | 11 | 42 | + | TSS region | transcription start site region 101874 | |
Rai1 | 11 | 94184 | + | protein coding gene | retinoic acid induced 1 | |
Tssr101875 | 11 | 20 | + | TSS region | transcription start site region 101875 | |
Tssr101876 | 11 | 26 | + | TSS region | transcription start site region 101876 | |
Tssr101877 | 11 | 18 | + | TSS region | transcription start site region 101877 | |
Tssr108274 | 11 | 22 | - | TSS region | transcription start site region 108274 | |
4930412M03Rik | 11 | 3011 | - | lincRNA gene | RIKEN cDNA 4930412M03 gene | |
Cpgi2976 | 11 | 789 | CpG island | CpG island 2976 | ||
Tssr108275 | 11 | 11 | - | TSS region | transcription start site region 108275 | |
Cpgi2977 | 11 | 1716 | CpG island | CpG island 2977 | ||
Tssr101878 | 11 | 68 | + | TSS region | transcription start site region 101878 | |
Tssr101879 | 11 | 14 | + | TSS region | transcription start site region 101879 | |
Cpgi2978 | 11 | 2218 | CpG island | CpG island 2978 | ||
Tssr101880 | 11 | 30 | + | TSS region | transcription start site region 101880 | |
Tssr108276 | 11 | 47 | - | TSS region | transcription start site region 108276 | |
Srebf1 | 11 | 23492 | - | protein coding gene | sterol regulatory element binding transcription factor 1 | |
Tssr108277 | 11 | 34 | - | TSS region | transcription start site region 108277 | |
Cpgi2979 | 11 | 352 | CpG island | CpG island 2979 | ||
Mir6921 | 11 | 79 | - | miRNA gene | microRNA 6921 | |
Mir6922 | 11 | 65 | - | miRNA gene | microRNA 6922 | |
Cpgi2980 | 11 | 1126 | CpG island | CpG island 2980 | ||
Tssr108278 | 11 | 18 | - | TSS region | transcription start site region 108278 | |
Cpgi2981 | 11 | 660 | CpG island | CpG island 2981 | ||
Tssr108279 | 11 | 11 | - | TSS region | transcription start site region 108279 | |
Tssr108280 | 11 | 82 | - | TSS region | transcription start site region 108280 | |
Cpgi2982 | 11 | 717 | CpG island | CpG island 2982 | ||
Tssr108281 | 11 | 18 | - | TSS region | transcription start site region 108281 | |
Tssr108282 | 11 | 20 | - | TSS region | transcription start site region 108282 | |
Tssr108283 | 11 | 18 | - | TSS region | transcription start site region 108283 | |
Tom1l2 | 11 | 126191 | - | protein coding gene | target of myb1-like 2 (chicken) | |
Tssr108284 | 11 | 14 | - | TSS region | transcription start site region 108284 | |
Tssr108285 | 11 | 17 | - | TSS region | transcription start site region 108285 | |
Tssr108286 | 11 | 23 | - | TSS region | transcription start site region 108286 | |
Tssr101881 | 11 | 12 | + | TSS region | transcription start site region 101881 | |
Gm12265 | 11 | 1120 | + | antisense lncRNA gene | predicted gene 12265 | |
Gm38501 | 11 | 3882 | - | lncRNA gene | predicted gene, 38501 | |
Tssr108287 | 11 | 11 | - | TSS region | transcription start site region 108287 | |
Tssr108288 | 11 | 34 | - | TSS region | transcription start site region 108288 | |
Gm27711 | 11 | 117 | - | miRNA gene | predicted gene, 27711 | |
Gm12266 | 11 | 961 | + | pseudogene | predicted gene 12266 | |
Cpgi2983 | 11 | 901 | CpG island | CpG island 2983 | ||
Tssr108289 | 11 | 27 | - | TSS region | transcription start site region 108289 | |
Tssr108290 | 11 | 5 | - | TSS region | transcription start site region 108290 | |
Tssr101882 | 11 | 14 | + | TSS region | transcription start site region 101882 | |
Tssr101883 | 11 | 84 | + | TSS region | transcription start site region 101883 | |
Drc3 | 11 | 41012 | + | protein coding gene | dynein regulatory complex subunit 3 | |
Tssr101884 | 11 | 23 | + | TSS region | transcription start site region 101884 | |
Atpaf2 | 11 | 17831 | - | protein coding gene | ATP synthase mitochondrial F1 complex assembly factor 2 | |
Cpgi2984 | 11 | 1649 | CpG island | CpG island 2984 | ||
Tssr108291 | 11 | 34 | - | TSS region | transcription start site region 108291 | |
Tssr101885 | 11 | 5 | + | TSS region | transcription start site region 101885 | |
Gid4 | 11 | 28132 | + | protein coding gene | GID complex subunit 4, VID24 homolog | |
Tssr101886 | 11 | 29 | + | TSS region | transcription start site region 101886 | |
Tssr101887 | 11 | 7 | + | TSS region | transcription start site region 101887 | |
Tssr101888 | 11 | 63 | + | TSS region | transcription start site region 101888 | |
Tssr101889 | 11 | 26 | + | TSS region | transcription start site region 101889 | |
Tssr101890 | 11 | 58 | + | TSS region | transcription start site region 101890 | |
Tssr101891 | 11 | 18 | + | TSS region | transcription start site region 101891 | |
Tssr108292 | 11 | 42 | - | TSS region | transcription start site region 108292 | |
Tssr108293 | 11 | 26 | - | TSS region | transcription start site region 108293 | |
Tssr101892 | 11 | 5 | + | TSS region | transcription start site region 101892 | |
Gm12268 | 11 | 441 | + | pseudogene | predicted gene 12268 | |
Gm12267 | 11 | 760 | - | pseudogene | predicted gene 12267 | |
Cpgi2985 | 11 | 633 | CpG island | CpG island 2985 | ||
Tssr101893 | 11 | 70 | + | TSS region | transcription start site region 101893 | |
Drg2 | 11 | 14135 | + | protein coding gene | developmentally regulated GTP binding protein 2 | |
Tssr101894 | 11 | 15 | + | TSS region | transcription start site region 101894 | |
Myo15 | 11 | 59030 | + | protein coding gene | myosin XV | |
Tssr101895 | 11 | 15 | + | TSS region | transcription start site region 101895 | |
Cpgi2986 | 11 | 818 | CpG island | CpG island 2986 | ||
Cpgi2987 | 11 | 654 | CpG island | CpG island 2987 | ||
Cpgi2988 | 11 | 458 | CpG island | CpG island 2988 | ||
Cpgi2989 | 11 | 163 | CpG island | CpG island 2989 | ||
Cpgi2990 | 11 | 648 | CpG island | CpG island 2990 | ||
D11Mit26 | 11 | 190 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 26 |