Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:59737269-59837283

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mprip 11 59662473 to 59780860 118387 + protein coding gene myosin phosphatase Rho interacting protein
1700007J10Rik 11 59725917 to 59740154 14237 - lncRNA gene RIKEN cDNA 1700007J10 gene
Tssr101861 11 59740258 to 59740278 20 + TSS region transcription start site region 101861
Tssr101862 11 59750159 to 59750187 28 + TSS region transcription start site region 101862
Gm12264 11 59775286 to 59780321 5035 - antisense lncRNA gene predicted gene 12264
Pld6 11 59783897 to 59787645 3748 - protein coding gene phospholipase D family, member 6
Cpgi2967 11 59787109 to 59787932 823 CpG island CpG island 2967
Tssr108239 11 59787192 to 59787201 9 - TSS region transcription start site region 108239
Tssr108240 11 59787210 to 59787231 21 - TSS region transcription start site region 108240
Tssr108241 11 59787235 to 59787244 9 - TSS region transcription start site region 108241
Tssr108242 11 59787269 to 59787283 14 - TSS region transcription start site region 108242
Tssr108243 11 59787284 to 59787295 11 - TSS region transcription start site region 108243
Tssr108244 11 59787313 to 59787322 9 - TSS region transcription start site region 108244
Tssr108245 11 59787636 to 59787683 47 - TSS region transcription start site region 108245
Flcn 11 59791408 to 59810016 18608 - protein coding gene folliculin
Cpgi2968 11 59809536 to 59810327 791 CpG island CpG island 2968
Tssr108246 11 59809774 to 59809847 73 - TSS region transcription start site region 108246
Tssr108247 11 59810026 to 59810044 18 - TSS region transcription start site region 108247
Gm16062 11 59810080 to 59818362 8282 + antisense lncRNA gene predicted gene 16062
Tssr101863 11 59810107 to 59810133 26 + TSS region transcription start site region 101863
Tssr101864 11 59810287 to 59810299 12 + TSS region transcription start site region 101864
Tssr101865 11 59810309 to 59810334 25 + TSS region transcription start site region 101865
Gm24939 11 59813137 to 59813273 136 + rRNA gene predicted gene, 24939
Cops3 11 59817795 to 59839837 22042 - protein coding gene COP9 signalosome subunit 3
Dp(11Cops3-Rnf112)1Jrl 11 59817795 to 61454131 1636336 chromosomal duplication duplication, Chr 11, James R Lupski 1
Del(11Cops3-Rnf112)1Jrl 11 59817795 to 61454131 1636336 complex/cluster/region deletion, Chr 11, James R Lupski 1
Del(11Cops3-Gid4)4Jrl 11 59817795 to 60445277 627482 complex/cluster/region deletion, Chr 11, James R Lupski 4
Del(11Cops3-Gid4)3Jrl 11 59817795 to 60445277 627482 cytogenetic marker deletion, Chr 11, James R Lupski 3
Tssr108248 11 59826956 to 59826965 9 - TSS region transcription start site region 108248
Tssr108249 11 59836923 to 59836941 18 - TSS region transcription start site region 108249