Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:5911998-6032506

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gck 11 5900820 to 5950081 49261 - protein coding gene glucokinase
Tssr106664 11 5915095 to 5915100 5 - TSS region transcription start site region 106664
Tssr106665 11 5915106 to 5915113 7 - TSS region transcription start site region 106665
Tssr106666 11 5915126 to 5915141 15 - TSS region transcription start site region 106666
Gm11967 11 5915315 to 5916731 1416 + antisense lncRNA gene predicted gene 11967
Tssr106667 11 5949999 to 5950009 10 - TSS region transcription start site region 106667
Tssr106668 11 5950018 to 5950063 45 - TSS region transcription start site region 106668
Cpgi2548 11 5955265 to 5956328 1063 CpG island CpG island 2548
Tssr100217 11 5955754 to 5955821 67 + TSS region transcription start site region 100217
Ykt6 11 5955758 to 5967780 12022 + protein coding gene YKT6 v-SNARE homolog (S. cerevisiae)
Camk2b 11 5969642 to 6066125 96483 - protein coding gene calcium/calmodulin-dependent protein kinase II, beta
Tssr106669 11 5971726 to 5971738 12 - TSS region transcription start site region 106669
Tssr106670 11 5971763 to 5971775 12 - TSS region transcription start site region 106670
Cpgi2549 11 5971998 to 5972506 508 CpG island CpG island 2549
Tssr106671 11 5972446 to 5972472 26 - TSS region transcription start site region 106671
Tssr106672 11 5972684 to 5972708 24 - TSS region transcription start site region 106672
Tssr106673 11 5976192 to 5976216 24 - TSS region transcription start site region 106673
Tssr3419 11 5976230 to 5976238 8 - TSS region transcription start site region 3419
Tssr106674 11 5976319 to 5976329 10 - TSS region transcription start site region 106674
Tssr106675 11 5989658 to 5989670 12 - TSS region transcription start site region 106675
Tssr106676 11 6003179 to 6003191 12 - TSS region transcription start site region 106676
Tssr106677 11 6003202 to 6003218 16 - TSS region transcription start site region 106677
Gm40812 11 6006268 to 6010745 4477 + lncRNA gene predicted gene, 40812
Tssr106678 11 6008819 to 6008851 32 - TSS region transcription start site region 106678
Tssr106679 11 6018604 to 6018641 37 - TSS region transcription start site region 106679
Tssr106680 11 6029043 to 6029052 9 - TSS region transcription start site region 106680
Tssr106681 11 6029216 to 6029249 33 - TSS region transcription start site region 106681