Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:58984247-59184250

Filter by:
35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim11 11 58978093 to 58991458 13365 + protein coding gene tripartite motif-containing 11
Tssr108185 11 58991740 to 58991765 25 - TSS region transcription start site region 108185
Cpgi2948 11 58994244 to 58994804 560 CpG island CpG island 2948
Obscn 11 58994256 to 59136375 142119 - protein coding gene obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
Tssr108186 11 58999220 to 58999237 17 - TSS region transcription start site region 108186
Tssr108187 11 58999238 to 58999281 43 - TSS region transcription start site region 108187
Tssr101781 11 58999359 to 58999370 11 + TSS region transcription start site region 101781
Tssr108188 11 58999362 to 58999407 45 - TSS region transcription start site region 108188
Tssr108189 11 59002182 to 59002193 11 - TSS region transcription start site region 108189
Tssr108190 11 59002198 to 59002231 33 - TSS region transcription start site region 108190
Tssr108191 11 59002355 to 59002366 11 - TSS region transcription start site region 108191
Tssr108192 11 59002374 to 59002385 11 - TSS region transcription start site region 108192
Tssr108193 11 59002391 to 59002401 10 - TSS region transcription start site region 108193
Tssr108194 11 59002421 to 59002449 28 - TSS region transcription start site region 108194
Gm10435 11 59002910 to 59007293 4383 + antisense lncRNA gene predicted gene 10435
Tssr101782 11 59002920 to 59002950 30 + TSS region transcription start site region 101782
Tssr101783 11 59002957 to 59002969 12 + TSS region transcription start site region 101783
Tssr101784 11 59002974 to 59002981 7 + TSS region transcription start site region 101784
Cpgi2949 11 59044818 to 59045092 274 CpG island CpG island 2949
Tssr108195 11 59084247 to 59084250 3 - TSS region transcription start site region 108195
Tssr101785 11 59116459 to 59116460 1 + TSS region transcription start site region 101785
Tssr108196 11 59120925 to 59120962 37 - TSS region transcription start site region 108196
Cpgi2950 11 59134387 to 59136471 2084 CpG island CpG island 2950
Tssr108197 11 59139247 to 59139280 33 - TSS region transcription start site region 108197
Iba57 11 59155369 to 59163739 8370 - protein coding gene IBA57 homolog, iron-sulfur cluster assembly
Cpgi2951 11 59163103 to 59164080 977 CpG island CpG island 2951
Tssr108198 11 59163281 to 59163323 42 - TSS region transcription start site region 108198
Tssr108199 11 59163696 to 59163726 30 - TSS region transcription start site region 108199
Tssr108200 11 59163759 to 59163788 29 - TSS region transcription start site region 108200
Tssr108201 11 59164527 to 59164548 21 - TSS region transcription start site region 108201
Gjc2 11 59175568 to 59183213 7645 - protein coding gene gap junction protein, gamma 2
Cpgi2952 11 59175783 to 59177833 2050 CpG island CpG island 2952
Tssr108202 11 59182794 to 59182801 7 - TSS region transcription start site region 108202
Tssr108203 11 59182810 to 59182833 23 - TSS region transcription start site region 108203
Guk1 11 59183875 to 59192212 8337 - protein coding gene guanylate kinase 1