Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:5875820-5975081

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pold2 11 5872180 to 5878256 6076 - protein coding gene polymerase (DNA directed), delta 2, regulatory subunit
Tssr106653 11 5876880 to 5876909 29 - TSS region transcription start site region 106653
Cpgi2545 11 5877896 to 5878627 731 CpG island CpG island 2545
Tssr106654 11 5878207 to 5878243 36 - TSS region transcription start site region 106654
Tssr106655 11 5878251 to 5878260 9 - TSS region transcription start site region 106655
Tssr100216 11 5878368 to 5878377 9 + TSS region transcription start site region 100216
Myl7 11 5896637 to 5898782 2145 - protein coding gene myosin, light polypeptide 7, regulatory
Tssr106656 11 5896664 to 5896691 27 - TSS region transcription start site region 106656
Tssr106657 11 5896739 to 5896765 26 - TSS region transcription start site region 106657
Tssr106658 11 5897986 to 5897997 11 - TSS region transcription start site region 106658
Tssr106659 11 5898010 to 5898043 33 - TSS region transcription start site region 106659
Tssr106660 11 5898528 to 5898541 13 - TSS region transcription start site region 106660
Tssr106661 11 5898560 to 5898574 14 - TSS region transcription start site region 106661
Tssr106662 11 5898617 to 5898632 15 - TSS region transcription start site region 106662
Tssr106663 11 5898771 to 5898788 17 - TSS region transcription start site region 106663
Gck 11 5900820 to 5950081 49261 - protein coding gene glucokinase
Cpgi2546 11 5901618 to 5902462 844 CpG island CpG island 2546
Cpgi2547 11 5902954 to 5903217 263 CpG island CpG island 2547
Tssr106664 11 5915095 to 5915100 5 - TSS region transcription start site region 106664
Tssr106665 11 5915106 to 5915113 7 - TSS region transcription start site region 106665
Tssr106666 11 5915126 to 5915141 15 - TSS region transcription start site region 106666
Gm11967 11 5915315 to 5916731 1416 + antisense lncRNA gene predicted gene 11967
Tssr106667 11 5949999 to 5950009 10 - TSS region transcription start site region 106667
Tssr106668 11 5950018 to 5950063 45 - TSS region transcription start site region 106668
Cpgi2548 11 5955265 to 5956328 1063 CpG island CpG island 2548
Tssr100217 11 5955754 to 5955821 67 + TSS region transcription start site region 100217
Ykt6 11 5955758 to 5967780 12022 + protein coding gene YKT6 v-SNARE homolog (S. cerevisiae)
Camk2b 11 5969642 to 6066125 96483 - protein coding gene calcium/calmodulin-dependent protein kinase II, beta
Tssr106669 11 5971726 to 5971738 12 - TSS region transcription start site region 106669
Tssr106670 11 5971763 to 5971775 12 - TSS region transcription start site region 106670
Cpgi2549 11 5971998 to 5972506 508 CpG island CpG island 2549
Tssr106671 11 5972446 to 5972472 26 - TSS region transcription start site region 106671
Tssr106672 11 5972684 to 5972708 24 - TSS region transcription start site region 106672