Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:58743440-58913554

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr316 11 58752734 to 58759671 6937 + protein coding gene olfactory receptor 316
Olfr315 11 58778089 to 58779086 997 + protein coding gene olfactory receptor 315
Cpgi2934 11 58778477 to 58778896 419 CpG island CpG island 2934
Tssr101750 11 58782956 to 58782969 13 + TSS region transcription start site region 101750
Tssr101751 11 58782983 to 58782988 5 + TSS region transcription start site region 101751
Olfr314 11 58786139 to 58787269 1130 + protein coding gene olfactory receptor 314
Tssr101752 11 58790897 to 58790928 31 + TSS region transcription start site region 101752
Fam183b 11 58792797 to 58801960 9163 - protein coding gene family with sequence similarity 183, member B
Tssr108169 11 58801904 to 58801943 39 - TSS region transcription start site region 108169
Tssr108170 11 58801944 to 58801968 24 - TSS region transcription start site region 108170
Tssr108171 11 58801971 to 58801979 8 - TSS region transcription start site region 108171
Tssr108172 11 58802193 to 58802221 28 - TSS region transcription start site region 108172
Tssr108173 11 58802229 to 58802242 13 - TSS region transcription start site region 108173
Olfr313 11 58816928 to 58818001 1073 + protein coding gene olfactory receptor 313
Skts-fp2 11 58828440 to 85175703 26347263 QTL skin tumor susceptibility in FVB and PWK 2
D11Mit155a 11 58828440 to 58828554 114 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 155a
Olfr312 11 58831156 to 58832082 926 + protein coding gene olfactory receptor 312
D11Mit155b 11 58838468 to 58838578 110 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 155b
Olfr311 11 58841116 to 58842042 926 + protein coding gene olfactory receptor 311
Cpgi2935 11 58847029 to 58847508 479 CpG island CpG island 2935
Tssr101753 11 58847153 to 58847226 73 + TSS region transcription start site region 101753
Gm12258 11 58847158 to 58861956 14798 + protein coding gene predicted gene 12258
Gm12259 11 58865965 to 58867154 1189 + lincRNA gene predicted gene 12259
Cpgi2936 11 58867076 to 58867581 505 CpG island CpG island 2936
Tssr101754 11 58867204 to 58867229 25 + TSS region transcription start site region 101754
2810021J22Rik 11 58867216 to 58883288 16072 + protein coding gene RIKEN cDNA 2810021J22 gene
Tssr101755 11 58867230 to 58867275 45 + TSS region transcription start site region 101755
Tssr101756 11 58884042 to 58884074 32 + TSS region transcription start site region 101756
Tssr101757 11 58884089 to 58884098 9 + TSS region transcription start site region 101757
Tssr101758 11 58884101 to 58884113 12 + TSS region transcription start site region 101758
Zfp39 11 58888153 to 58904225 16072 - protein coding gene zinc finger protein 39
Tssr108174 11 58889298 to 58889301 3 - TSS region transcription start site region 108174
Gm12256 11 58889710 to 58891548 1838 + antisense lncRNA gene predicted gene 12256
Tssr108175 11 58889713 to 58889726 13 - TSS region transcription start site region 108175
Tssr101759 11 58893703 to 58893710 7 + TSS region transcription start site region 101759
Cpgi2937 11 58903766 to 58904439 673 CpG island CpG island 2937
Tssr108176 11 58904145 to 58904157 12 - TSS region transcription start site region 108176
Tssr108177 11 58904158 to 58904168 10 - TSS region transcription start site region 108177
Tssr108178 11 58904173 to 58904217 44 - TSS region transcription start site region 108178
Tssr108179 11 58904219 to 58904236 17 - TSS region transcription start site region 108179
Gm12257 11 58904402 to 58906170 1768 + antisense lncRNA gene predicted gene 12257