Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:58320617-58460649

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp672 11 58315114 to 58330339 15225 - protein coding gene zinc finger protein 672
Cpgi2928 11 58322678 to 58324022 1344 CpG island CpG island 2928
1700047K16Rik 11 58322988 to 58324439 1451 + unclassified non-coding RNA gene RIKEN cDNA 1700047K16 gene
Tssr108152 11 58323139 to 58323161 22 - TSS region transcription start site region 108152
Tssr108153 11 58323295 to 58323357 62 - TSS region transcription start site region 108153
Tssr108154 11 58323358 to 58323372 14 - TSS region transcription start site region 108154
Cpgi2929 11 58329935 to 58331079 1144 CpG island CpG island 2929
Tssr108155 11 58330238 to 58330253 15 - TSS region transcription start site region 108155
Tssr108156 11 58330319 to 58330358 39 - TSS region transcription start site region 108156
Tssr101721 11 58330712 to 58330735 23 + TSS region transcription start site region 101721
Sh3bp5l 11 58330724 to 58347728 17004 + protein coding gene SH3 binding domain protein 5 like
Tssr101722 11 58330744 to 58330777 33 + TSS region transcription start site region 101722
Gm33660 11 58361794 to 58372784 10990 + lncRNA gene predicted gene, 33660
Tssr101723 11 58377541 to 58377546 5 + TSS region transcription start site region 101723
Lypd8 11 58379032 to 58390541 11509 + protein coding gene LY6/PLAUR domain containing 8
Tssr101724 11 58379036 to 58379052 16 + TSS region transcription start site region 101724
Tssr101725 11 58379636 to 58379676 40 + TSS region transcription start site region 101725
Tssr101726 11 58380541 to 58380552 11 + TSS region transcription start site region 101726
Tssr101727 11 58380561 to 58380619 58 + TSS region transcription start site region 101727
Tssr101728 11 58380620 to 58380637 17 + TSS region transcription start site region 101728
Tssr101729 11 58382280 to 58382299 19 + TSS region transcription start site region 101729
Tssr101730 11 58382310 to 58382325 15 + TSS region transcription start site region 101730
Tssr101731 11 58382333 to 58382348 15 + TSS region transcription start site region 101731
Tssr101732 11 58382746 to 58382789 43 + TSS region transcription start site region 101732
Tssr101733 11 58382796 to 58382814 18 + TSS region transcription start site region 101733
Tssr101734 11 58382837 to 58382846 9 + TSS region transcription start site region 101734
Tssr101735 11 58384607 to 58384620 13 + TSS region transcription start site region 101735
Tssr101736 11 58384668 to 58384688 20 + TSS region transcription start site region 101736
Tssr101737 11 58384719 to 58384728 9 + TSS region transcription start site region 101737
Tssr101738 11 58384740 to 58384746 6 + TSS region transcription start site region 101738
Tssr101739 11 58386723 to 58386761 38 + TSS region transcription start site region 101739
Tssr108157 11 58386770 to 58386804 34 - TSS region transcription start site region 108157
Tssr101740 11 58386787 to 58386806 19 + TSS region transcription start site region 101740
Tssr101741 11 58386815 to 58386824 9 + TSS region transcription start site region 101741
Tssr108158 11 58386822 to 58386836 14 - TSS region transcription start site region 108158
Tssr101742 11 58390088 to 58390135 47 + TSS region transcription start site region 101742
Tssr108159 11 58390151 to 58390158 7 - TSS region transcription start site region 108159
Tssr101743 11 58390157 to 58390234 77 + TSS region transcription start site region 101743
Tssr108160 11 58390164 to 58390178 14 - TSS region transcription start site region 108160
Tssr108161 11 58390229 to 58390257 28 - TSS region transcription start site region 108161
Tssr101744 11 58390239 to 58390250 11 + TSS region transcription start site region 101744
Tssr108162 11 58390258 to 58390289 31 - TSS region transcription start site region 108162
Tssr101745 11 58390268 to 58390291 23 + TSS region transcription start site region 101745
Tssr3508 11 58390307 to 58390320 13 - TSS region transcription start site region 3508
Tssr101746 11 58390617 to 58390649 32 + TSS region transcription start site region 101746
Gm12251 11 58392769 to 58393560 791 - pseudogene predicted gene 12251
Tssr101747 11 58393924 to 58393934 10 + TSS region transcription start site region 101747
Gm12252 11 58396297 to 58396515 218 - pseudogene predicted gene 12252
Tssr3509 11 58421080 to 58421087 7 + TSS region transcription start site region 3509
Tssr101748 11 58421103 to 58421118 15 + TSS region transcription start site region 101748
1810065E05Rik 11 58421111 to 58426023 4912 + protein coding gene RIKEN cDNA 1810065E05 gene
Tssr3510 11 58421124 to 58421151 27 + TSS region transcription start site region 3510
Tssr3511 11 58421671 to 58421672 1 + TSS region transcription start site region 3511
Gm12253 11 58432559 to 58441622 9063 + protein coding gene predicted gene 12253
Lypd9 11 58446149 to 58452923 6774 - protein coding gene LY6/PLAUR domain containing 9
Tssr108163 11 58452919 to 58452950 31 - TSS region transcription start site region 108163
Olfr30 11 58454915 to 58455980 1065 - protein coding gene olfactory receptor 30