Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:58100002-58188539

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr101674 11 58102782 to 58102814 32 + TSS region transcription start site region 101674
Tssr101675 11 58102862 to 58102874 12 + TSS region transcription start site region 101675
Tssr101676 11 58102906 to 58102917 11 + TSS region transcription start site region 101676
Cpgi2920 11 58103298 to 58104831 1533 CpG island CpG island 2920
Tssr101677 11 58103970 to 58104027 57 + TSS region transcription start site region 101677
Tssr101678 11 58104031 to 58104050 19 + TSS region transcription start site region 101678
Tssr101679 11 58104051 to 58104081 30 + TSS region transcription start site region 101679
Tssr101680 11 58104082 to 58104137 55 + TSS region transcription start site region 101680
Tssr101681 11 58104138 to 58104191 53 + TSS region transcription start site region 101681
Cnot8 11 58104153 to 58118594 14441 + protein coding gene CCR4-NOT transcription complex, subunit 8
Tssr101682 11 58104239 to 58104280 41 + TSS region transcription start site region 101682
Tssr101683 11 58117726 to 58117750 24 + TSS region transcription start site region 101683
Gemin5 11 58120002 to 58168539 48537 - protein coding gene gem nuclear organelle associated protein 5
Gm33350 11 58126007 to 58136198 10191 + lncRNA gene predicted gene, 33350
Gm12246 11 58126068 to 58128512 2444 + antisense lncRNA gene predicted gene 12246
Tssr108140 11 58139520 to 58139534 14 - TSS region transcription start site region 108140
Tssr108141 11 58139540 to 58139551 11 - TSS region transcription start site region 108141
Cpgi2921 11 58167990 to 58168866 876 CpG island CpG island 2921
Tssr108142 11 58168467 to 58168544 77 - TSS region transcription start site region 108142
Cpgi2922 11 58171518 to 58172016 498 CpG island CpG island 2922
Tssr101684 11 58171648 to 58171688 40 + TSS region transcription start site region 101684
Mrpl22 11 58171661 to 58179565 7904 + protein coding gene mitochondrial ribosomal protein L22
Tssr108143 11 58171996 to 58172005 9 - TSS region transcription start site region 108143
Tssr101685 11 58183795 to 58183817 22 + TSS region transcription start site region 101685
Tssr101686 11 58183826 to 58183871 45 + TSS region transcription start site region 101686
Tssr101687 11 58183886 to 58183897 11 + TSS region transcription start site region 101687
Tssr101688 11 58183918 to 58183931 13 + TSS region transcription start site region 101688
Tssr101689 11 58183935 to 58183947 12 + TSS region transcription start site region 101689
Gm12250 11 58187739 to 58189012 1273 + pseudogene predicted gene 12250