Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:57852395-58073034

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33026 11 57856987 to 57869386 12399 - lncRNA gene predicted gene, 33026
Gm12244 11 57880896 to 57881186 290 + pseudogene predicted gene 12244
Gm33078 11 57911741 to 57923298 11557 + lncRNA gene predicted gene, 33078
D11Mit143 11 57914737 to 57914828 91 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 143
Gm12245 11 57948729 to 57949085 356 - pseudogene predicted gene 12245
Cpgi2916 11 57962395 to 57963034 639 CpG island CpG island 2916
Tssr3507 11 57963657 to 57963682 25 - TSS region transcription start site region 3507
Gm26025 11 57969342 to 57969612 270 + unclassified non-coding RNA gene predicted gene, 26025
Gm12249 11 57970244 to 57973134 2890 - lincRNA gene predicted gene 12249
Tssr101649 11 57973184 to 57973199 15 + TSS region transcription start site region 101649
Tssr101650 11 57973256 to 57973265 9 + TSS region transcription start site region 101650
Tssr101651 11 57973402 to 57973429 27 + TSS region transcription start site region 101651
Cpgi2917 11 58008392 to 58010351 1959 CpG island CpG island 2917
Tssr101652 11 58008861 to 58008935 74 + TSS region transcription start site region 101652
Tssr101653 11 58008937 to 58008959 22 + TSS region transcription start site region 101653
Tssr101654 11 58008966 to 58008987 21 + TSS region transcription start site region 101654
Larp1 11 58009064 to 58062034 52970 + protein coding gene La ribonucleoprotein domain family, member 1
Tssr101655 11 58009079 to 58009090 11 + TSS region transcription start site region 101655
Tssr101656 11 58009131 to 58009144 13 + TSS region transcription start site region 101656
Tssr101657 11 58009161 to 58009206 45 + TSS region transcription start site region 101657
Tssr101658 11 58009575 to 58009584 9 + TSS region transcription start site region 101658
2510010K19Rik 11 58009918 to 58010175 257 unclassified gene RIKEN cDNA 2510010K19 gene
Tssr101659 11 58009989 to 58009999 10 + TSS region transcription start site region 101659
Tssr101660 11 58010019 to 58010047 28 + TSS region transcription start site region 101660
Tssr108135 11 58010628 to 58010637 9 - TSS region transcription start site region 108135
Tssr101661 11 58012531 to 58012535 4 + TSS region transcription start site region 101661
Tssr101662 11 58040413 to 58040422 9 + TSS region transcription start site region 101662
Tssr101663 11 58043104 to 58043109 5 + TSS region transcription start site region 101663
Tssr101664 11 58049595 to 58049643 48 + TSS region transcription start site region 101664
Tssr101665 11 58049647 to 58049659 12 + TSS region transcription start site region 101665
Tssr101666 11 58051306 to 58051326 20 + TSS region transcription start site region 101666
Tssr101667 11 58051335 to 58051345 10 + TSS region transcription start site region 101667
Tssr101668 11 58059226 to 58059248 22 + TSS region transcription start site region 101668
Tssr101669 11 58059321 to 58059337 16 + TSS region transcription start site region 101669
Tssr101670 11 58059382 to 58059427 45 + TSS region transcription start site region 101670
Tssr101671 11 58060999 to 58061011 12 + TSS region transcription start site region 101671
Gm12248 11 58063671 to 58093175 29504 - protein coding gene predicted gene 12248
Tssr108136 11 58073018 to 58073031 13 - TSS region transcription start site region 108136