Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:5777860-5888016

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ube2d-ps 11 5762150 to 5784710 22560 + pseudogene ubiquitin-conjugating enzyme E2D, pseudogene
Tssr100197 11 5784790 to 5784794 4 + TSS region transcription start site region 100197
Cpgi2541 11 5788133 to 5789123 990 CpG island CpG island 2541
Tssr106640 11 5788262 to 5788276 14 - TSS region transcription start site region 106640
Tssr106641 11 5788358 to 5788434 76 - TSS region transcription start site region 106641
Tssr100198 11 5788480 to 5788560 80 + TSS region transcription start site region 100198
Dbnl 11 5788488 to 5800962 12474 + protein coding gene drebrin-like
Tssr100199 11 5793709 to 5793726 17 + TSS region transcription start site region 100199
Tssr100200 11 5797511 to 5797526 15 + TSS region transcription start site region 100200
Tssr100201 11 5797540 to 5797554 14 + TSS region transcription start site region 100201
Tssr100202 11 5797987 to 5798005 18 + TSS region transcription start site region 100202
Tssr100203 11 5799284 to 5799305 21 + TSS region transcription start site region 100203
Tssr100204 11 5800147 to 5800184 37 + TSS region transcription start site region 100204
Pgam2 11 5801640 to 5803733 2093 - protein coding gene phosphoglycerate mutase 2
Tssr100205 11 5803269 to 5803280 11 + TSS region transcription start site region 100205
Tssr106642 11 5803319 to 5803347 28 - TSS region transcription start site region 106642
Tssr106643 11 5803558 to 5803569 11 - TSS region transcription start site region 106643
Tssr106644 11 5803683 to 5803689 6 - TSS region transcription start site region 106644
Tssr106645 11 5803706 to 5803728 22 - TSS region transcription start site region 106645
Tssr106646 11 5803735 to 5803759 24 - TSS region transcription start site region 106646
Gm11966 11 5818497 to 5818583 86 - pseudogene predicted gene 11966
Polm 11 5827860 to 5838016 10156 - protein coding gene polymerase (DNA directed), mu
Cpgi2542 11 5837314 to 5838064 750 CpG island CpG island 2542
Tssr106647 11 5837727 to 5837736 9 - TSS region transcription start site region 106647
Tssr106648 11 5837745 to 5837758 13 - TSS region transcription start site region 106648
Tssr106649 11 5837760 to 5837835 75 - TSS region transcription start site region 106649
Tssr100206 11 5849316 to 5849326 10 + TSS region transcription start site region 100206
Cpgi2543 11 5861553 to 5862550 997 CpG island CpG island 2543
Tssr100207 11 5861868 to 5861879 11 + TSS region transcription start site region 100207
Tssr100208 11 5861886 to 5861966 80 + TSS region transcription start site region 100208
Aebp1 11 5861947 to 5872088 10141 + protein coding gene AE binding protein 1
Tssr100209 11 5861976 to 5861989 13 + TSS region transcription start site region 100209
Tssr106650 11 5862294 to 5862301 7 - TSS region transcription start site region 106650
Tssr100210 11 5863029 to 5863048 19 + TSS region transcription start site region 100210
Tssr106651 11 5863967 to 5864003 36 - TSS region transcription start site region 106651
Tssr100211 11 5863978 to 5864003 25 + TSS region transcription start site region 100211
Tssr100212 11 5864217 to 5864241 24 + TSS region transcription start site region 100212
Tssr106652 11 5866968 to 5866990 22 - TSS region transcription start site region 106652
Cpgi2544 11 5869422 to 5869639 217 CpG island CpG island 2544
Tssr100213 11 5870551 to 5870562 11 + TSS region transcription start site region 100213
Tssr100214 11 5871626 to 5871648 22 + TSS region transcription start site region 100214
Tssr100215 11 5871771 to 5871782 11 + TSS region transcription start site region 100215
Pold2 11 5872180 to 5878256 6076 - protein coding gene polymerase (DNA directed), delta 2, regulatory subunit
Tssr106653 11 5876880 to 5876909 29 - TSS region transcription start site region 106653
Cpgi2545 11 5877896 to 5878627 731 CpG island CpG island 2545
Tssr106654 11 5878207 to 5878243 36 - TSS region transcription start site region 106654
Tssr106655 11 5878251 to 5878260 9 - TSS region transcription start site region 106655
Tssr100216 11 5878368 to 5878377 9 + TSS region transcription start site region 100216