MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:57656300-57826402

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Galnt10	11	57645442 to 57787501	142059	+	protein coding gene	polypeptide N-acetylgalactosaminyltransferase 10
4933426K07Rik	11	57655415 to 57657826	2411	-	antisense lncRNA gene	RIKEN cDNA 4933426K07 gene
Tssr108119	11	57657805 to 57657839	34	-	TSS region	transcription start site region 108119
5830435N06Rik	11	57665726 to 57667169	1443		unclassified gene	RIKEN cDNA 5830435N06 gene
Gm46282	11	57706093 to 57710163	4070	+	lncRNA gene	predicted gene, 46282
Tssr101642	11	57708976 to 57708997	21	+	TSS region	transcription start site region 101642
Tssr101643	11	57717311 to 57717314	3	+	TSS region	transcription start site region 101643
Gm24582	11	57741300 to 57741402	102	+	snRNA gene	predicted gene, 24582
n-R5s69	11	57764427 to 57764545	118	+	rRNA gene	nuclear encoded rRNA 5S 69
2010001A14Rik	11	57795499 to 57801417	5918	-	lncRNA gene	RIKEN cDNA 2010001A14 gene
Cpgi2908	11	57800700 to 57802833	2133		CpG island	CpG island 2908
Tssr108120	11	57801411 to 57801432	21	-	TSS region	transcription start site region 108120
Tssr108121	11	57801436 to 57801453	17	-	TSS region	transcription start site region 108121
Tssr108122	11	57801459 to 57801487	28	-	TSS region	transcription start site region 108122
Tssr101644	11	57801575 to 57801649	74	+	TSS region	transcription start site region 101644
Sap30l	11	57801637 to 57810217	8580	+	protein coding gene	SAP30-like
Tssr101645	11	57807330 to 57807332	2	+	TSS region	transcription start site region 101645
Cpgi2909	11	57825040 to 57825240	200		CpG island	CpG island 2909