Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:57651300-57831402

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Galnt10 11 57645442 to 57787501 142059 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 10
4933426K07Rik 11 57655415 to 57657826 2411 - antisense lncRNA gene RIKEN cDNA 4933426K07 gene
Tssr108119 11 57657805 to 57657839 34 - TSS region transcription start site region 108119
5830435N06Rik 11 57665726 to 57667169 1443 unclassified gene RIKEN cDNA 5830435N06 gene
Gm46282 11 57706093 to 57710163 4070 + lncRNA gene predicted gene, 46282
Tssr101642 11 57708976 to 57708997 21 + TSS region transcription start site region 101642
Tssr101643 11 57717311 to 57717314 3 + TSS region transcription start site region 101643
Gm24582 11 57741300 to 57741402 102 + snRNA gene predicted gene, 24582
n-R5s69 11 57764427 to 57764545 118 + rRNA gene nuclear encoded rRNA 5S 69
2010001A14Rik 11 57795499 to 57801417 5918 - lncRNA gene RIKEN cDNA 2010001A14 gene
Cpgi2908 11 57800700 to 57802833 2133 CpG island CpG island 2908
Tssr108120 11 57801411 to 57801432 21 - TSS region transcription start site region 108120
Tssr108121 11 57801436 to 57801453 17 - TSS region transcription start site region 108121
Tssr108122 11 57801459 to 57801487 28 - TSS region transcription start site region 108122
Tssr101644 11 57801575 to 57801649 74 + TSS region transcription start site region 101644
Sap30l 11 57801637 to 57810217 8580 + protein coding gene SAP30-like
Tssr101645 11 57807330 to 57807332 2 + TSS region transcription start site region 101645
Cpgi2909 11 57825040 to 57825240 200 CpG island CpG island 2909
Cpgi2910 11 57827530 to 57828360 830 CpG island CpG island 2910
Hand1 11 57828713 to 57832147 3434 - protein coding gene heart and neural crest derivatives expressed 1
Tssr108123 11 57828956 to 57828963 7 - TSS region transcription start site region 108123
Tssr108124 11 57829017 to 57829020 3 - TSS region transcription start site region 108124
Tssr108125 11 57829049 to 57829065 16 - TSS region transcription start site region 108125
Cpgi2911 11 57829073 to 57829742 669 CpG island CpG island 2911
Tssr108126 11 57829235 to 57829246 11 - TSS region transcription start site region 108126
Tssr3506 11 57829270 to 57829271 1 - TSS region transcription start site region 3506
Tssr108127 11 57829308 to 57829313 5 - TSS region transcription start site region 108127
Tssr108128 11 57829315 to 57829325 10 - TSS region transcription start site region 108128
Tssr108129 11 57829446 to 57829460 14 - TSS region transcription start site region 108129
Cpgi2912 11 57831235 to 57832019 784 CpG island CpG island 2912