Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:5758319-5848347

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Urgcp 11 5713417 to 5762376 48959 - protein coding gene upregulator of cell proliferation
Cpgi2540 11 5761752 to 5762817 1065 CpG island CpG island 2540
Tssr106638 11 5762044 to 5762053 9 - TSS region transcription start site region 106638
Tssr100196 11 5762121 to 5762182 61 + TSS region transcription start site region 100196
Ube2d-ps 11 5762150 to 5784710 22560 + pseudogene ubiquitin-conjugating enzyme E2D, pseudogene
Tssr106639 11 5762358 to 5762404 46 - TSS region transcription start site region 106639
Tssr100197 11 5784790 to 5784794 4 + TSS region transcription start site region 100197
Cpgi2541 11 5788133 to 5789123 990 CpG island CpG island 2541
Tssr106640 11 5788262 to 5788276 14 - TSS region transcription start site region 106640
Tssr106641 11 5788358 to 5788434 76 - TSS region transcription start site region 106641
Tssr100198 11 5788480 to 5788560 80 + TSS region transcription start site region 100198
Dbnl 11 5788488 to 5800962 12474 + protein coding gene drebrin-like
Tssr100199 11 5793709 to 5793726 17 + TSS region transcription start site region 100199
Tssr100200 11 5797511 to 5797526 15 + TSS region transcription start site region 100200
Tssr100201 11 5797540 to 5797554 14 + TSS region transcription start site region 100201
Tssr100202 11 5797987 to 5798005 18 + TSS region transcription start site region 100202
Tssr100203 11 5799284 to 5799305 21 + TSS region transcription start site region 100203
Tssr100204 11 5800147 to 5800184 37 + TSS region transcription start site region 100204
Pgam2 11 5801640 to 5803733 2093 - protein coding gene phosphoglycerate mutase 2
Tssr100205 11 5803269 to 5803280 11 + TSS region transcription start site region 100205
Tssr106642 11 5803319 to 5803347 28 - TSS region transcription start site region 106642
Tssr106643 11 5803558 to 5803569 11 - TSS region transcription start site region 106643
Tssr106644 11 5803683 to 5803689 6 - TSS region transcription start site region 106644
Tssr106645 11 5803706 to 5803728 22 - TSS region transcription start site region 106645
Tssr106646 11 5803735 to 5803759 24 - TSS region transcription start site region 106646
Gm11966 11 5818497 to 5818583 86 - pseudogene predicted gene 11966
Polm 11 5827860 to 5838016 10156 - protein coding gene polymerase (DNA directed), mu
Cpgi2542 11 5837314 to 5838064 750 CpG island CpG island 2542
Tssr106647 11 5837727 to 5837736 9 - TSS region transcription start site region 106647
Tssr106648 11 5837745 to 5837758 13 - TSS region transcription start site region 106648
Tssr106649 11 5837760 to 5837835 75 - TSS region transcription start site region 106649