MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:5747150-5799710

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Urgcp	11	5713417 to 5762376	48959	-	protein coding gene	upregulator of cell proliferation
5730405O12Rik	11	5755006 to 5758298	3292		unclassified gene	RIKEN cDNA 5730405O12 gene
Cpgi2540	11	5761752 to 5762817	1065		CpG island	CpG island 2540
Tssr106638	11	5762044 to 5762053	9	-	TSS region	transcription start site region 106638
Tssr100196	11	5762121 to 5762182	61	+	TSS region	transcription start site region 100196
Ube2d-ps	11	5762150 to 5784710	22560	+	pseudogene	ubiquitin-conjugating enzyme E2D, pseudogene
Tssr106639	11	5762358 to 5762404	46	-	TSS region	transcription start site region 106639
Tssr100197	11	5784790 to 5784794	4	+	TSS region	transcription start site region 100197
Cpgi2541	11	5788133 to 5789123	990		CpG island	CpG island 2541
Tssr106640	11	5788262 to 5788276	14	-	TSS region	transcription start site region 106640
Tssr106641	11	5788358 to 5788434	76	-	TSS region	transcription start site region 106641
Tssr100198	11	5788480 to 5788560	80	+	TSS region	transcription start site region 100198
Dbnl	11	5788488 to 5800962	12474	+	protein coding gene	drebrin-like
Tssr100199	11	5793709 to 5793726	17	+	TSS region	transcription start site region 100199
Tssr100200	11	5797511 to 5797526	15	+	TSS region	transcription start site region 100200
Tssr100201	11	5797540 to 5797554	14	+	TSS region	transcription start site region 100201
Tssr100202	11	5797987 to 5798005	18	+	TSS region	transcription start site region 100202
Tssr100203	11	5799284 to 5799305	21	+	TSS region	transcription start site region 100203