Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:55909118-57333571

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45963 11 55781368 to 55963249 181881 + lncRNA gene predicted gene, 45963
Gm12239 11 55970355 to 56098599 128244 + antisense lncRNA gene predicted gene 12239
Nmur2 11 56024990 to 56040987 15997 - protein coding gene neuromedin U receptor 2
Cpgi2903 11 56040423 to 56040607 184 CpG island CpG island 2903
Tssr108107 11 56040985 to 56041023 38 - TSS region transcription start site region 108107
D11Mit64 11 56042051 to 56042223 172 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 64
Tssr101627 11 56072910 to 56072918 8 + TSS region transcription start site region 101627
Gm46260 11 56106459 to 56119893 13434 - lncRNA gene predicted gene, 46260
Cpgi2904 11 56117279 to 56117489 210 CpG island CpG island 2904
D11Mit131 11 56155514 to 56155663 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 131
Gm12240 11 56262855 to 56263083 228 - pseudogene predicted gene 12240
Gm24253 11 56263165 to 56263240 75 - snoRNA gene predicted gene, 24253
Tssr108108 11 56269952 to 56269963 11 - TSS region transcription start site region 108108
D11Mit313 11 56285046 to 56285167 121 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 313
Gm32500 11 56386988 to 56425531 38543 - lncRNA gene predicted gene, 32500
Cpgi2905 11 56459262 to 56459461 199 CpG island CpG island 2905
Gm12241 11 56459349 to 56460074 725 + pseudogene predicted gene 12241
Tssr108109 11 56459359 to 56459373 14 - TSS region transcription start site region 108109
Gm22603 11 56482949 to 56483044 95 + snoRNA gene predicted gene, 22603
Gm32649 11 56619118 to 56623571 4453 - lncRNA gene predicted gene, 32649
Gm46261 11 56625709 to 56665284 39575 - lncRNA gene predicted gene, 46261
D11Mit142 11 56684724 to 56684873 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 142
Gm39826 11 56719507 to 56726642 7135 - lncRNA gene predicted gene, 39826
D11Mit274 11 56741660 to 56741773 113 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 274
D11Dcr13 11 56934669 to 56934764 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 13
D11Mit164 11 56973201 to 56973332 131 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 164
Tssr101628 11 57011559 to 57011587 28 + TSS region transcription start site region 101628
Gria1 11 57011571 to 57330244 318673 + protein coding gene glutamate receptor, ionotropic, AMPA1 (alpha 1)
Tssr101629 11 57011707 to 57011718 11 + TSS region transcription start site region 101629
Tssr101630 11 57011724 to 57011735 11 + TSS region transcription start site region 101630
Tssr101631 11 57011743 to 57011782 39 + TSS region transcription start site region 101631
Tssr101632 11 57011798 to 57011827 29 + TSS region transcription start site region 101632
Tssr101633 11 57011832 to 57011843 11 + TSS region transcription start site region 101633
Tssr101634 11 57011945 to 57011946 1 + TSS region transcription start site region 101634
Tssr101635 11 57012747 to 57012785 38 + TSS region transcription start site region 101635
Tssr108110 11 57112423 to 57112458 35 - TSS region transcription start site region 108110
Tssr101636 11 57128903 to 57128920 17 + TSS region transcription start site region 101636
Tssr108111 11 57199389 to 57199392 3 - TSS region transcription start site region 108111
Tmc1m2 11 114267131 to 56973201 -57293930 QTL Tmc1 modifier 2