Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:5549684-5709337

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm22471	11	5560606 to 5560735	129	-	snoRNA gene	predicted gene, 22471
Gm3186	11	5563940 to 5564560	620	-	pseudogene	predicted gene 3186
Gm39573	11	5565391 to 5569118	3727	-	lncRNA gene	predicted gene, 39573
Tssr100189	11	5569679 to 5569690	11	+	TSS region	transcription start site region 100189
Ankrd36	11	5569684 to 5689337	119653	+	protein coding gene	ankyrin repeat domain 36
Tssr100190	11	5574107 to 5574115	8	+	TSS region	transcription start site region 100190
Tssr100191	11	5574156 to 5574167	11	+	TSS region	transcription start site region 100191
Tssr100192	11	5595435 to 5595438	3	+	TSS region	transcription start site region 100192
Tssr100193	11	5628740 to 5628754	14	+	TSS region	transcription start site region 100193
Tssr100194	11	5628756 to 5628767	11	+	TSS region	transcription start site region 100194
Cpgi2537	11	5634053 to 5634549	496		CpG island	CpG island 2537
Gm11964	11	5634139 to 5634582	443	+	pseudogene	predicted gene 11964
Gm11965	11	5678356 to 5678632	276	-	pseudogene	predicted gene 11965
Mrps24	11	5703983 to 5707717	3734	-	protein coding gene	mitochondrial ribosomal protein S24
Cpgi2538	11	5706997 to 5707885	888		CpG island	CpG island 2538
Tssr106633	11	5707658 to 5707708	50	-	TSS region	transcription start site region 106633
Tssr106634	11	5707729 to 5707732	3	-	TSS region	transcription start site region 106634