Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:55230609-55356564

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc36a1	11	55204350 to 55236330	31980	+	protein coding gene	solute carrier family 36 (proton/amino acid symporter), member 1
Fat2	11	55250609 to 55336564	85955	-	protein coding gene	FAT atypical cadherin 2
Cpgi2899	11	55262417 to 55262808	391		CpG island	CpG island 2899
Tssr108050	11	55310089 to 55310100	11	-	TSS region	transcription start site region 108050
Tssr108051	11	55310704 to 55310712	8	-	TSS region	transcription start site region 108051
Tssr108052	11	55311055 to 55311090	35	-	TSS region	transcription start site region 108052
Tssr108053	11	55312143 to 55312191	48	-	TSS region	transcription start site region 108053
Tssr108054	11	55314568 to 55314596	28	-	TSS region	transcription start site region 108054
Tssr108055	11	55336480 to 55336520	40	-	TSS region	transcription start site region 108055
Tssr108056	11	55336544 to 55336553	9	-	TSS region	transcription start site region 108056
Tssr108057	11	55336561 to 55336590	29	-	TSS region	transcription start site region 108057
Tssr108058	11	55336597 to 55336631	34	-	TSS region	transcription start site region 108058
Tssr108059	11	55336650 to 55336657	7	-	TSS region	transcription start site region 108059
Tssr108060	11	55337784 to 55337793	9	-	TSS region	transcription start site region 108060