Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:55190609-55396564

Filter by:
41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc36a1os 11 55191719 to 55197682 5963 - antisense lncRNA gene solute carrier family 36 (proton/amino acid symporter), member 1, opposite strand
Cpgi2898 11 55204157 to 55204986 829 CpG island CpG island 2898
Tssr101611 11 55204319 to 55204386 67 + TSS region transcription start site region 101611
Slc36a1 11 55204350 to 55236330 31980 + protein coding gene solute carrier family 36 (proton/amino acid symporter), member 1
Tssr101612 11 55204396 to 55204412 16 + TSS region transcription start site region 101612
Tssr101613 11 55213783 to 55213814 31 + TSS region transcription start site region 101613
Tssr101614 11 55217709 to 55217732 23 + TSS region transcription start site region 101614
Fat2 11 55250609 to 55336564 85955 - protein coding gene FAT atypical cadherin 2
Cpgi2899 11 55262417 to 55262808 391 CpG island CpG island 2899
Tssr108050 11 55310089 to 55310100 11 - TSS region transcription start site region 108050
Tssr108051 11 55310704 to 55310712 8 - TSS region transcription start site region 108051
Tssr108052 11 55311055 to 55311090 35 - TSS region transcription start site region 108052
Tssr108053 11 55312143 to 55312191 48 - TSS region transcription start site region 108053
Tssr108054 11 55314568 to 55314596 28 - TSS region transcription start site region 108054
Tssr108055 11 55336480 to 55336520 40 - TSS region transcription start site region 108055
Tssr108056 11 55336544 to 55336553 9 - TSS region transcription start site region 108056
Tssr108057 11 55336561 to 55336590 29 - TSS region transcription start site region 108057
Tssr108058 11 55336597 to 55336631 34 - TSS region transcription start site region 108058
Tssr108059 11 55336650 to 55336657 7 - TSS region transcription start site region 108059
Tssr108060 11 55337784 to 55337793 9 - TSS region transcription start site region 108060
Gm31842 11 55378329 to 55384302 5973 - lncRNA gene predicted gene, 31842
Etax9 11 55394159 to 72319101 16924942 QTL ethanol induced ataxia 9
Sparc 11 55394159 to 55420080 25921 - protein coding gene secreted acidic cysteine rich glycoprotein
Tssr108061 11 55394562 to 55394599 37 - TSS region transcription start site region 108061
Tssr108062 11 55394661 to 55394725 64 - TSS region transcription start site region 108062
Tssr108063 11 55394726 to 55394738 12 - TSS region transcription start site region 108063
Tssr108064 11 55394745 to 55394756 11 - TSS region transcription start site region 108064
Tssr108065 11 55394848 to 55394964 116 - TSS region transcription start site region 108065
Tssr101615 11 55394977 to 55395009 32 + TSS region transcription start site region 101615
Tssr108066 11 55395135 to 55395188 53 - TSS region transcription start site region 108066
Tssr108067 11 55395348 to 55395419 71 - TSS region transcription start site region 108067
Tssr101616 11 55395430 to 55395444 14 + TSS region transcription start site region 101616
Tssr108068 11 55395452 to 55395486 34 - TSS region transcription start site region 108068
Tssr108069 11 55395493 to 55395504 11 - TSS region transcription start site region 108069
Tssr108070 11 55395508 to 55395517 9 - TSS region transcription start site region 108070
Tssr108071 11 55395528 to 55395546 18 - TSS region transcription start site region 108071
Tssr108072 11 55395557 to 55395566 9 - TSS region transcription start site region 108072
Tssr108073 11 55395574 to 55395594 20 - TSS region transcription start site region 108073
Tssr101617 11 55395801 to 55395864 63 + TSS region transcription start site region 101617
Tssr108074 11 55395836 to 55395877 41 - TSS region transcription start site region 108074
Tssr108075 11 55395902 to 55395940 38 - TSS region transcription start site region 108075