Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:54215303-54317277

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(11Irf1-D11Mit23)1Rub 11 53770014 to 54236047 466033 cytogenetic marker deletion, Chr 11, Edward M Rubin 1
Tssr107978 11 54225207 to 54225228 21 - TSS region transcription start site region 107978
D11Mit23 11 54235926 to 54236047 121 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 23
Pregq1 11 54235926 to 83842826 29606900 QTL pregnancy QTL 1
Csf2 11 54247271 to 54249667 2396 - protein coding gene colony stimulating factor 2 (granulocyte-macrophage)
Gm12223 11 54247600 to 54254495 6895 + antisense lncRNA gene predicted gene 12223
Tssr107979 11 54248481 to 54248492 11 - TSS region transcription start site region 107979
Tssr107980 11 54248505 to 54248516 11 - TSS region transcription start site region 107980
Tssr107981 11 54248554 to 54248561 7 - TSS region transcription start site region 107981
Tssr107982 11 54249001 to 54249012 11 - TSS region transcription start site region 107982
Tssr107983 11 54249335 to 54249385 50 - TSS region transcription start site region 107983
Tssr107984 11 54249640 to 54249644 4 - TSS region transcription start site region 107984
Tssr101478 11 54261755 to 54261763 8 + TSS region transcription start site region 101478
Il3 11 54265303 to 54267277 1974 - protein coding gene interleukin 3
Tssr107985 11 54267276 to 54267280 4 - TSS region transcription start site region 107985
Tssr101479 11 54270828 to 54270830 2 + TSS region transcription start site region 101479
Cpgi2886 11 54303782 to 54304764 982 CpG island CpG island 2886
Tssr101480 11 54303802 to 54303844 42 + TSS region transcription start site region 101480
Acsl6 11 54303824 to 54364756 60932 + protein coding gene acyl-CoA synthetase long-chain family member 6
Tssr101481 11 54304048 to 54304059 11 + TSS region transcription start site region 101481
Tssr101482 11 54304139 to 54304157 18 + TSS region transcription start site region 101482
Tssr101483 11 54304180 to 54304236 56 + TSS region transcription start site region 101483
Tssr101484 11 54304248 to 54304259 11 + TSS region transcription start site region 101484
Tssr107986 11 54310137 to 54310143 6 - TSS region transcription start site region 107986
Tssr101485 11 54314928 to 54314957 29 + TSS region transcription start site region 101485
Tssr101486 11 54314960 to 54314999 39 + TSS region transcription start site region 101486
Tssr101487 11 54315029 to 54315038 9 + TSS region transcription start site region 101487