Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:53260806-53340832

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hspa4 11 53259814 to 53300457 40643 - protein coding gene heat shock protein 4
Tssr107903 11 53265999 to 53266035 36 - TSS region transcription start site region 107903
Tssr107904 11 53266041 to 53266054 13 - TSS region transcription start site region 107904
Tssr107905 11 53266988 to 53267016 28 - TSS region transcription start site region 107905
Tssr101378 11 53267045 to 53267065 20 + TSS region transcription start site region 101378
Tssr107906 11 53269776 to 53269815 39 - TSS region transcription start site region 107906
Tssr107907 11 53271075 to 53271088 13 - TSS region transcription start site region 107907
Cpgi2859 11 53299593 to 53301059 1466 CpG island CpG island 2859
Tssr101379 11 53299855 to 53299872 17 + TSS region transcription start site region 101379
Tssr101380 11 53299884 to 53299895 11 + TSS region transcription start site region 101380
Tssr107908 11 53300177 to 53300179 2 - TSS region transcription start site region 107908
Tssr107909 11 53300187 to 53300198 11 - TSS region transcription start site region 107909
Tssr107910 11 53300199 to 53300221 22 - TSS region transcription start site region 107910
Tssr107911 11 53300332 to 53300341 9 - TSS region transcription start site region 107911
Tssr107912 11 53300373 to 53300515 142 - TSS region transcription start site region 107912
Tssr107913 11 53300530 to 53300540 10 - TSS region transcription start site region 107913
Tssr107914 11 53300686 to 53300704 18 - TSS region transcription start site region 107914
Tssr101381 11 53300806 to 53300832 26 + TSS region transcription start site region 101381
Gm30525 11 53302627 to 53308551 5924 - lncRNA gene predicted gene, 30525
Tssr107915 11 53307628 to 53307640 12 - TSS region transcription start site region 107915
Tssr107916 11 53307654 to 53307658 4 - TSS region transcription start site region 107916
Tssr3494 11 53315059 to 53315068 9 + TSS region transcription start site region 3494
Tssr107917 11 53324590 to 53324612 22 - TSS region transcription start site region 107917
Cpgi2860 11 53324591 to 53324928 337 CpG island CpG island 2860
Tssr101382 11 53324674 to 53324704 30 + TSS region transcription start site region 101382
Zcchc10 11 53324689 to 53333301 8612 + protein coding gene zinc finger, CCHC domain containing 10
Tssr101383 11 53330574 to 53330609 35 + TSS region transcription start site region 101383
Tssr101384 11 53330612 to 53330619 7 + TSS region transcription start site region 101384
Tssr101385 11 53332155 to 53332171 16 + TSS region transcription start site region 101385
Tssr101386 11 53332186 to 53332207 21 + TSS region transcription start site region 101386
Tssr101387 11 53332383 to 53332394 11 + TSS region transcription start site region 101387
Tssr101388 11 53332467 to 53332481 14 + TSS region transcription start site region 101388
Tssr101389 11 53332485 to 53332515 30 + TSS region transcription start site region 101389
Tssr101390 11 53332529 to 53332541 12 + TSS region transcription start site region 101390