Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:52931451-53300056

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fstl4 11 52764634 to 53188538 423904 + protein coding gene follistatin-like 4
Tssr107898 11 52997396 to 52997418 22 - TSS region transcription start site region 107898
Gm39824 11 53036474 to 53042619 6145 - lncRNA gene predicted gene, 39824
D11Mit311 11 53077240 to 53077356 116 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 311
Gm11186 11 53111451 to 53120056 8605 - antisense lncRNA gene predicted gene 11186
D11Mit273 11 53143826 to 53143949 123 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 273
D11Mit141 11 53143833 to 53143981 148 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 141
Tssr101377 11 53187606 to 53187611 5 + TSS region transcription start site region 101377
Gm11189 11 53200684 to 53201058 374 + pseudogene predicted gene 11189
D11Mit240 11 53228937 to 53229086 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 240
Tssr107899 11 53255631 to 53255637 6 - TSS region transcription start site region 107899
Tssr107900 11 53257707 to 53257715 8 - TSS region transcription start site region 107900
Tssr107901 11 53257716 to 53257741 25 - TSS region transcription start site region 107901
Tssr107902 11 53257742 to 53257758 16 - TSS region transcription start site region 107902
Hspa4 11 53259814 to 53300457 40643 - protein coding gene heat shock protein 4
Tssr107903 11 53265999 to 53266035 36 - TSS region transcription start site region 107903
Tssr107904 11 53266041 to 53266054 13 - TSS region transcription start site region 107904
Tssr107905 11 53266988 to 53267016 28 - TSS region transcription start site region 107905
Tssr101378 11 53267045 to 53267065 20 + TSS region transcription start site region 101378
Tssr107906 11 53269776 to 53269815 39 - TSS region transcription start site region 107906
Tssr107907 11 53271075 to 53271088 13 - TSS region transcription start site region 107907
Cpgi2859 11 53299593 to 53301059 1466 CpG island CpG island 2859
Tssr101379 11 53299855 to 53299872 17 + TSS region transcription start site region 101379
Tssr101380 11 53299884 to 53299895 11 + TSS region transcription start site region 101380