Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:52386428-52418723

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vdac1	11	52360862 to 52389397	28535	+	protein coding gene	voltage-dependent anion channel 1
Tssr101360	11	52389139 to 52389146	7	+	TSS region	transcription start site region 101360
Tssr107895	11	52390049 to 52390082	33	-	TSS region	transcription start site region 107895
Cpgi2856	11	52396267 to 52397167	900		CpG island	CpG island 2856
Tssr101361	11	52396390 to 52396395	5	+	TSS region	transcription start site region 101361
Tssr101362	11	52396414 to 52396449	35	+	TSS region	transcription start site region 101362
9530068E07Rik	11	52396428 to 52408723	12295	+	protein coding gene	RIKEN cDNA 9530068E07 gene
Tssr101363	11	52396451 to 52396473	22	+	TSS region	transcription start site region 101363
Tssr101364	11	52396482 to 52396494	12	+	TSS region	transcription start site region 101364
Tssr101365	11	52396540 to 52396543	3	+	TSS region	transcription start site region 101365
Tssr101366	11	52396585 to 52396601	16	+	TSS region	transcription start site region 101366
Tssr101367	11	52402911 to 52402932	21	+	TSS region	transcription start site region 101367
Tssr107896	11	52403368 to 52403390	22	-	TSS region	transcription start site region 107896
Tssr101368	11	52403441 to 52403481	40	+	TSS region	transcription start site region 101368
Tssr101369	11	52405255 to 52405262	7	+	TSS region	transcription start site region 101369
Gm12208	11	52405316 to 52405478	162	+	pseudogene	predicted gene 12208
Tssr101370	11	52407171 to 52407185	14	+	TSS region	transcription start site region 101370
Tssr101371	11	52407402 to 52407454	52	+	TSS region	transcription start site region 101371