Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Eae44b | 11 | 14143721 | QTL | experimental allergic encephalomyelitis susceptibility 44b | ||
Vmbic10 | 11 | 11308439 | QTL | ventral midbrain iron content 10 | ||
Tcpm1 | 11 | 2163451 | QTL | T cell phenotype modifier 1 | ||
Tcf7 | 11 | 30643 | - | protein coding gene | transcription factor 7, T cell specific | |
A630014C17Rik | 11 | 10124 | + | antisense lncRNA gene | RIKEN cDNA A630014C17 gene | |
Tssr107879 | 11 | 33 | - | TSS region | transcription start site region 107879 | |
Tssr107880 | 11 | 12 | - | TSS region | transcription start site region 107880 | |
Tssr107881 | 11 | 15 | - | TSS region | transcription start site region 107881 | |
Cpgi2853 | 11 | 2219 | CpG island | CpG island 2853 | ||
Tssr107882 | 11 | 15 | - | TSS region | transcription start site region 107882 | |
Tssr101335 | 11 | 17 | + | TSS region | transcription start site region 101335 | |
Tssr107883 | 11 | 14 | - | TSS region | transcription start site region 107883 | |
Tssr107884 | 11 | 23 | - | TSS region | transcription start site region 107884 | |
Tssr107885 | 11 | 9 | - | TSS region | transcription start site region 107885 | |
Tssr107886 | 11 | 22 | - | TSS region | transcription start site region 107886 | |
Tssr107887 | 11 | 92 | - | TSS region | transcription start site region 107887 | |
Tssr107888 | 11 | 25 | - | TSS region | transcription start site region 107888 | |
Tssr101336 | 11 | 12 | + | TSS region | transcription start site region 101336 | |
Tssr101337 | 11 | 8 | + | TSS region | transcription start site region 101337 | |
Tssr107889 | 11 | 11 | - | TSS region | transcription start site region 107889 | |
Tssr107890 | 11 | 12 | - | TSS region | transcription start site region 107890 | |
Tssr101338 | 11 | 13 | + | TSS region | transcription start site region 101338 | |
Tssr101339 | 11 | 11 | + | TSS region | transcription start site region 101339 | |
Tssr101340 | 11 | 16 | + | TSS region | transcription start site region 101340 | |
Gm30217 | 11 | 11602 | + | lncRNA gene | predicted gene, 30217 | |
Tssr101341 | 11 | 13 | + | TSS region | transcription start site region 101341 | |
Tssr101342 | 11 | 18 | + | TSS region | transcription start site region 101342 | |
Tssr101343 | 11 | 9 | + | TSS region | transcription start site region 101343 | |
Tssr101344 | 11 | 15 | + | TSS region | transcription start site region 101344 | |
Tssr101345 | 11 | 3 | + | TSS region | transcription start site region 101345 | |
Tssr101346 | 11 | 11 | + | TSS region | transcription start site region 101346 | |
Tssr101347 | 11 | 26 | + | TSS region | transcription start site region 101347 | |
Tssr101348 | 11 | 9 | + | TSS region | transcription start site region 101348 | |
Tssr101349 | 11 | 9 | + | TSS region | transcription start site region 101349 | |
Tssr101350 | 11 | 19 | + | TSS region | transcription start site region 101350 | |
Tssr101351 | 11 | 23 | + | TSS region | transcription start site region 101351 | |
Tssr101352 | 11 | 29 | + | TSS region | transcription start site region 101352 | |
Cpgi2854 | 11 | 278 | CpG island | CpG island 2854 | ||
Tssr101353 | 11 | 11 | + | TSS region | transcription start site region 101353 | |
Tssr107891 | 11 | 11 | - | TSS region | transcription start site region 107891 | |
Tssr107892 | 11 | 15 | - | TSS region | transcription start site region 107892 | |
Tssr101354 | 11 | 9 | + | TSS region | transcription start site region 101354 | |
Tssr101355 | 11 | 9 | + | TSS region | transcription start site region 101355 | |
D11Mit87 | 11 | 138 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 87 | ||
Cpgi2855 | 11 | 1632 | CpG island | CpG island 2855 | ||
Tssr101356 | 11 | 111 | + | TSS region | transcription start site region 101356 | |
Vdac1 | 11 | 28535 | + | protein coding gene | voltage-dependent anion channel 1 | |
Tssr107893 | 11 | 16 | - | TSS region | transcription start site region 107893 | |
Tssr107894 | 11 | 50 | - | TSS region | transcription start site region 107894 | |
Tssr101357 | 11 | 15 | + | TSS region | transcription start site region 101357 | |
Tssr101358 | 11 | 57 | + | TSS region | transcription start site region 101358 | |
Tssr101359 | 11 | 26 | + | TSS region | transcription start site region 101359 | |
Tssr101360 | 11 | 7 | + | TSS region | transcription start site region 101360 | |
Tssr107895 | 11 | 33 | - | TSS region | transcription start site region 107895 | |
Cpgi2856 | 11 | 900 | CpG island | CpG island 2856 | ||
Tssr101361 | 11 | 5 | + | TSS region | transcription start site region 101361 | |
Tssr101362 | 11 | 35 | + | TSS region | transcription start site region 101362 | |
9530068E07Rik | 11 | 12295 | + | protein coding gene | RIKEN cDNA 9530068E07 gene | |
Tssr101363 | 11 | 22 | + | TSS region | transcription start site region 101363 | |
Tssr101364 | 11 | 12 | + | TSS region | transcription start site region 101364 | |
Tssr101365 | 11 | 3 | + | TSS region | transcription start site region 101365 | |
Tssr101366 | 11 | 16 | + | TSS region | transcription start site region 101366 | |
Tssr101367 | 11 | 21 | + | TSS region | transcription start site region 101367 | |
Tssr107896 | 11 | 22 | - | TSS region | transcription start site region 107896 | |
Tssr101368 | 11 | 40 | + | TSS region | transcription start site region 101368 | |
Tssr101369 | 11 | 7 | + | TSS region | transcription start site region 101369 | |
Gm12208 | 11 | 162 | + | pseudogene | predicted gene 12208 | |
Tssr101370 | 11 | 14 | + | TSS region | transcription start site region 101370 | |
Tssr101371 | 11 | 52 | + | TSS region | transcription start site region 101371 | |
Gm12209 | 11 | 595 | - | pseudogene | predicted gene 12209 | |
Cpgi2857 | 11 | 282 | CpG island | CpG island 2857 | ||
Tssr107897 | 11 | 7 | - | TSS region | transcription start site region 107897 | |
Gm12210 | 11 | 152 | - | pseudogene | predicted gene 12210 | |
Tssr101372 | 11 | 1 | + | TSS region | transcription start site region 101372 | |
Gm30366 | 11 | 84531 | + | lncRNA gene | predicted gene, 30366 | |
Gm39823 | 11 | 1266 | + | lncRNA gene | predicted gene, 39823 | |
Cpgi2858 | 11 | 1956 | CpG island | CpG island 2858 | ||
Fstl4 | 11 | 423904 | + | protein coding gene | follistatin-like 4 | |
Tssr101373 | 11 | 42 | + | TSS region | transcription start site region 101373 | |
Tssr101374 | 11 | 3 | + | TSS region | transcription start site region 101374 | |
Tssr101375 | 11 | 2 | + | TSS region | transcription start site region 101375 | |
Tssr101376 | 11 | 2 | + | TSS region | transcription start site region 101376 | |
Tssr107898 | 11 | 22 | - | TSS region | transcription start site region 107898 | |
Gm39824 | 11 | 6145 | - | lncRNA gene | predicted gene, 39824 | |
D11Mit311 | 11 | 116 | DNA segment | DNA Segment, Chr 11, Massachusetts Institute of Technology 311 | ||
Gm11186 | 11 | 8605 | - | antisense lncRNA gene | predicted gene 11186 | |
D11Mit273 | 11 | 123 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 273 | ||
D11Mit141 | 11 | 148 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 141 | ||
Tssr101377 | 11 | 5 | + | TSS region | transcription start site region 101377 | |
Gm11189 | 11 | 374 | + | pseudogene | predicted gene 11189 | |
D11Mit240 | 11 | 149 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 240 | ||
Tssr107899 | 11 | 6 | - | TSS region | transcription start site region 107899 | |
Tssr107900 | 11 | 8 | - | TSS region | transcription start site region 107900 | |
Tssr107901 | 11 | 25 | - | TSS region | transcription start site region 107901 | |
Tssr107902 | 11 | 16 | - | TSS region | transcription start site region 107902 | |
Hspa4 | 11 | 40643 | - | protein coding gene | heat shock protein 4 | |
Tssr107903 | 11 | 36 | - | TSS region | transcription start site region 107903 | |
Tssr107904 | 11 | 13 | - | TSS region | transcription start site region 107904 | |
Tssr107905 | 11 | 28 | - | TSS region | transcription start site region 107905 | |
Tssr101378 | 11 | 20 | + | TSS region | transcription start site region 101378 | |
Tssr107906 | 11 | 39 | - | TSS region | transcription start site region 107906 | |
Tssr107907 | 11 | 13 | - | TSS region | transcription start site region 107907 | |
Cpgi2859 | 11 | 1466 | CpG island | CpG island 2859 | ||
Tssr101379 | 11 | 17 | + | TSS region | transcription start site region 101379 | |
Tssr101380 | 11 | 11 | + | TSS region | transcription start site region 101380 | |
Tssr107908 | 11 | 2 | - | TSS region | transcription start site region 107908 | |
Tssr107909 | 11 | 11 | - | TSS region | transcription start site region 107909 | |
Tssr107910 | 11 | 22 | - | TSS region | transcription start site region 107910 | |
Tssr107911 | 11 | 9 | - | TSS region | transcription start site region 107911 | |
Tssr107912 | 11 | 142 | - | TSS region | transcription start site region 107912 | |
Tssr107913 | 11 | 10 | - | TSS region | transcription start site region 107913 | |
Tssr107914 | 11 | 18 | - | TSS region | transcription start site region 107914 | |
Tssr101381 | 11 | 26 | + | TSS region | transcription start site region 101381 | |
Gm30525 | 11 | 5924 | - | lncRNA gene | predicted gene, 30525 | |
Tssr107915 | 11 | 12 | - | TSS region | transcription start site region 107915 | |
Tssr107916 | 11 | 4 | - | TSS region | transcription start site region 107916 | |
Tssr3494 | 11 | 9 | + | TSS region | transcription start site region 3494 | |
Tssr107917 | 11 | 22 | - | TSS region | transcription start site region 107917 | |
Cpgi2860 | 11 | 337 | CpG island | CpG island 2860 | ||
Tssr101382 | 11 | 30 | + | TSS region | transcription start site region 101382 | |
Zcchc10 | 11 | 8612 | + | protein coding gene | zinc finger, CCHC domain containing 10 | |
Tssr101383 | 11 | 35 | + | TSS region | transcription start site region 101383 | |
Tssr101384 | 11 | 7 | + | TSS region | transcription start site region 101384 | |
Tssr101385 | 11 | 16 | + | TSS region | transcription start site region 101385 | |
Tssr101386 | 11 | 21 | + | TSS region | transcription start site region 101386 | |
Tssr101387 | 11 | 11 | + | TSS region | transcription start site region 101387 | |
Tssr101388 | 11 | 14 | + | TSS region | transcription start site region 101388 | |
Tssr101389 | 11 | 30 | + | TSS region | transcription start site region 101389 | |
Tssr101390 | 11 | 12 | + | TSS region | transcription start site region 101390 | |
Gm11188 | 11 | 387 | - | pseudogene | predicted gene 11188 | |
Cpgi2861 | 11 | 1674 | CpG island | CpG island 2861 | ||
Tssr101391 | 11 | 48 | + | TSS region | transcription start site region 101391 | |
Tssr101392 | 11 | 17 | + | TSS region | transcription start site region 101392 | |
Aff4 | 11 | 70997 | + | protein coding gene | AF4/FMR2 family, member 4 | |
Tssr101393 | 11 | 14 | + | TSS region | transcription start site region 101393 | |
Tssr3495 | 11 | 10 | + | TSS region | transcription start site region 3495 | |
Tssr3496 | 11 | 7 | + | TSS region | transcription start site region 3496 | |
Tssr3497 | 11 | 9 | + | TSS region | transcription start site region 3497 | |
Tssr101394 | 11 | 7 | + | TSS region | transcription start site region 101394 | |
Tssr101395 | 11 | 15 | + | TSS region | transcription start site region 101395 | |
Tssr101396 | 11 | 11 | + | TSS region | transcription start site region 101396 | |
Tssr3498 | 11 | 8 | + | TSS region | transcription start site region 3498 | |
Tssr101397 | 11 | 40 | + | TSS region | transcription start site region 101397 | |
Tssr107918 | 11 | 7 | - | TSS region | transcription start site region 107918 | |
Tssr107919 | 11 | 12 | - | TSS region | transcription start site region 107919 | |
Tssr101398 | 11 | 35 | + | TSS region | transcription start site region 101398 | |
Gm32048 | 11 | 2217 | + | pseudogene | predicted gene, 32048 | |
Tssr101399 | 11 | 6 | + | TSS region | transcription start site region 101399 | |
Tssr101400 | 11 | 26 | + | TSS region | transcription start site region 101400 | |
Gm25930 | 11 | 106 | + | snRNA gene | predicted gene, 25930 | |
D11Ertd142e | 11 | 235 | DNA segment | DNA segment, Chr 11, ERATO Doi 142, expressed | ||
Mir6920 | 11 | 70 | + | miRNA gene | microRNA 6920 | |
Leap2 | 11 | 955 | - | protein coding gene | liver-expressed antimicrobial peptide 2 | |
Tssr107920 | 11 | 12 | - | TSS region | transcription start site region 107920 | |
Uqcrq | 11 | 2909 | - | protein coding gene | ubiquinol-cytochrome c reductase, complex III subunit VII | |
Cpgi2862 | 11 | 1295 | CpG island | CpG island 2862 | ||
Tssr107921 | 11 | 9 | - | TSS region | transcription start site region 107921 | |
Tssr107922 | 11 | 13 | - | TSS region | transcription start site region 107922 | |
Tssr107923 | 11 | 16 | - | TSS region | transcription start site region 107923 | |
Tssr107924 | 11 | 19 | - | TSS region | transcription start site region 107924 | |
Tssr101401 | 11 | 11 | + | TSS region | transcription start site region 101401 | |
Tssr107925 | 11 | 12 | - | TSS region | transcription start site region 107925 | |
Tssr107926 | 11 | 10 | - | TSS region | transcription start site region 107926 | |
Tssr107927 | 11 | 11 | - | TSS region | transcription start site region 107927 | |
Tssr107928 | 11 | 59 | - | TSS region | transcription start site region 107928 | |
Gdf9 | 11 | 6881 | + | protein coding gene | growth differentiation factor 9 | |
Tssr101402 | 11 | 10 | + | TSS region | transcription start site region 101402 | |
Gm30585 | 11 | 2424 | - | lncRNA gene | predicted gene, 30585 | |
D11Mit24 | 11 | 236 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 24 | ||
Gm10447 | 11 | 2306 | - | protein coding gene | predicted gene 10447 | |
Cpgi2863 | 11 | 731 | CpG island | CpG island 2863 | ||
Tssr101403 | 11 | 17 | + | TSS region | transcription start site region 101403 | |
Shroom1 | 11 | 10561 | + | protein coding gene | shroom family member 1 | |
Tssr101404 | 11 | 56 | + | TSS region | transcription start site region 101404 | |
Tssr101405 | 11 | 27 | + | TSS region | transcription start site region 101405 | |
Gm12212 | 11 | 1234 | - | antisense lncRNA gene | predicted gene 12212 | |
Cpgi2864 | 11 | 898 | CpG island | CpG island 2864 | ||
Cpgi2865 | 11 | 735 | CpG island | CpG island 2865 | ||
Gm9837 | 11 | 730 | - | protein coding gene | predicted gene 9837 | |
Cpgi2866 | 11 | 519 | CpG island | CpG island 2866 | ||
Sowaha | 11 | 3617 | - | protein coding gene | sosondowah ankyrin repeat domain family member A | |
Cpgi2867 | 11 | 2093 | CpG island | CpG island 2867 | ||
Tssr101406 | 11 | 7 | + | TSS region | transcription start site region 101406 | |
Tssr107929 | 11 | 30 | - | TSS region | transcription start site region 107929 | |
Tssr107930 | 11 | 14 | - | TSS region | transcription start site region 107930 | |
Tssr107931 | 11 | 17 | - | TSS region | transcription start site region 107931 | |
Gm9945 | 11 | 931 | + | protein coding gene | predicted gene 9945 | |
Tssr107932 | 11 | 38 | - | TSS region | transcription start site region 107932 | |
Tssr107933 | 11 | 19 | - | TSS region | transcription start site region 107933 | |
Gm19835 | 11 | 4911 | - | lncRNA gene | predicted gene, 19835 | |
Cpgi2868 | 11 | 275 | CpG island | CpG island 2868 | ||
Tssr101407 | 11 | 1 | + | TSS region | transcription start site region 101407 | |
Rpl9-ps3 | 11 | 575 | + | pseudogene | ribosomal protein L9, pseudogene 3 | |
Tssr101408 | 11 | 2 | + | TSS region | transcription start site region 101408 | |
Cpgi2869 | 11 | 1231 | CpG island | CpG island 2869 | ||
Tssr101409 | 11 | 66 | + | TSS region | transcription start site region 101409 | |
Sept8 | 11 | 29867 | + | protein coding gene | septin 8 | |
Tssr101410 | 11 | 46 | + | TSS region | transcription start site region 101410 | |
Tssr101411 | 11 | 13 | + | TSS region | transcription start site region 101411 | |
Tssr101412 | 11 | 9 | + | TSS region | transcription start site region 101412 |