Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:52231551-52261559

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2852 11 52231697 to 52232623 926 CpG island CpG island 2852
Tssr107849 11 52231884 to 52231897 13 - TSS region transcription start site region 107849
Skp1a 11 52231995 to 52246858 14863 + protein coding gene S-phase kinase-associated protein 1A
Tssr101319 11 52232028 to 52232041 13 + TSS region transcription start site region 101319
Tssr101320 11 52232175 to 52232180 5 + TSS region transcription start site region 101320
Tssr101321 11 52232183 to 52232228 45 + TSS region transcription start site region 101321
Tssr101322 11 52232237 to 52232256 19 + TSS region transcription start site region 101322
Tssr101323 11 52232264 to 52232286 22 + TSS region transcription start site region 101323
Tssr101324 11 52232306 to 52232315 9 + TSS region transcription start site region 101324
Gm12207 11 52233724 to 52236619 2895 + antisense lncRNA gene predicted gene 12207
D11Pjn4 11 52236615 to 52236770 155 DNA segment DNA segment, Chr 11, Patsy J. Nishina 4
Tssr3492 11 52241793 to 52241797 4 + TSS region transcription start site region 3492
Tssr101325 11 52246187 to 52246208 21 + TSS region transcription start site region 101325
Tssr101326 11 52246551 to 52246559 8 + TSS region transcription start site region 101326
Tcf7 11 52252371 to 52283014 30643 - protein coding gene transcription factor 7, T cell specific
Tssr107850 11 52252654 to 52252669 15 - TSS region transcription start site region 107850
Tssr107851 11 52252886 to 52252901 15 - TSS region transcription start site region 107851
Tssr107852 11 52253482 to 52253493 11 - TSS region transcription start site region 107852
Tssr101327 11 52253661 to 52253698 37 + TSS region transcription start site region 101327
Tssr101328 11 52253712 to 52253758 46 + TSS region transcription start site region 101328
Tssr107853 11 52253719 to 52253750 31 - TSS region transcription start site region 107853
Tssr107854 11 52253822 to 52253836 14 - TSS region transcription start site region 107854
Tssr107855 11 52253859 to 52253890 31 - TSS region transcription start site region 107855
Tssr3493 11 52253871 to 52253885 14 + TSS region transcription start site region 3493
Tssr107856 11 52253903 to 52253932 29 - TSS region transcription start site region 107856
Tssr101329 11 52256251 to 52256283 32 + TSS region transcription start site region 101329
Tssr107857 11 52256836 to 52256856 20 - TSS region transcription start site region 107857
Tssr107858 11 52256976 to 52256998 22 - TSS region transcription start site region 107858
Tssr107859 11 52257000 to 52257025 25 - TSS region transcription start site region 107859
Tssr107860 11 52257061 to 52257087 26 - TSS region transcription start site region 107860
Tssr107861 11 52257724 to 52257781 57 - TSS region transcription start site region 107861
Tssr107862 11 52257793 to 52257809 16 - TSS region transcription start site region 107862
Tssr107863 11 52258888 to 52258899 11 - TSS region transcription start site region 107863
Tssr107864 11 52260593 to 52260625 32 - TSS region transcription start site region 107864
Tssr101330 11 52261505 to 52261531 26 + TSS region transcription start site region 101330
Tssr101331 11 52261537 to 52261564 27 + TSS region transcription start site region 101331
Tssr107865 11 52261542 to 52261565 23 - TSS region transcription start site region 107865