Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:51668687-51886925

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
0610009B22Rik 11 51685386 to 51688874 3488 - protein coding gene RIKEN cDNA 0610009B22 gene
Cpgi2840 11 51688469 to 51689299 830 CpG island CpG island 2840
Tssr107822 11 51688503 to 51688514 11 - TSS region transcription start site region 107822
Tssr107823 11 51688614 to 51688669 55 - TSS region transcription start site region 107823
Sec24a 11 51692263 to 51757280 65017 - protein coding gene Sec24 related gene family, member A (S. cerevisiae)
Tssr107824 11 51693098 to 51693142 44 - TSS region transcription start site region 107824
Tssr107825 11 51693462 to 51693466 4 - TSS region transcription start site region 107825
Gm25291 11 51737779 to 51737922 143 - snoRNA gene predicted gene, 25291
Tssr3489 11 51755656 to 51755666 10 - TSS region transcription start site region 3489
Cpgi2841 11 51755709 to 51757099 1390 CpG island CpG island 2841
Tssr101289 11 51755941 to 51755944 3 + TSS region transcription start site region 101289
Tssr107826 11 51756378 to 51756493 115 - TSS region transcription start site region 107826
Cpgi2842 11 51763560 to 51764084 524 CpG island CpG island 2842
Tssr107827 11 51763596 to 51763637 41 - TSS region transcription start site region 107827
Tssr101290 11 51763654 to 51763669 15 + TSS region transcription start site region 101290
Tssr101291 11 51763682 to 51763749 67 + TSS region transcription start site region 101291
Sar1b 11 51763687 to 51791925 28238 + protein coding gene secretion associated Ras related GTPase 1B
Jade2 11 51813455 to 51857653 44198 - protein coding gene jade family PHD finger 2
Tssr107828 11 51833520 to 51833547 27 - TSS region transcription start site region 107828
Tssr107829 11 51834078 to 51834084 6 - TSS region transcription start site region 107829
Gm30110 11 51855510 to 51856597 1087 + lncRNA gene predicted gene, 30110
Cpgi2843 11 51855559 to 51858689 3130 CpG island CpG island 2843
Tssr107830 11 51857089 to 51857110 21 - TSS region transcription start site region 107830
Tssr107831 11 51857599 to 51857610 11 - TSS region transcription start site region 107831
Tssr107832 11 51857624 to 51857686 62 - TSS region transcription start site region 107832
Tssr107833 11 51857988 to 51858043 55 - TSS region transcription start site region 107833
Cpgi2844 11 51858740 to 51859146 406 CpG island CpG island 2844
Gm39820 11 51862017 to 51869812 7795 - lncRNA gene predicted gene, 39820
Tssr107834 11 51874997 to 51875000 3 - TSS region transcription start site region 107834
Tssr101292 11 51876085 to 51876110 25 + TSS region transcription start site region 101292
Tssr101293 11 51884007 to 51884014 7 + TSS region transcription start site region 101293
Gm39821 11 51884029 to 51889041 5012 + lncRNA gene predicted gene, 39821
Tssr101294 11 51884073 to 51884121 48 + TSS region transcription start site region 101294
Tssr101295 11 51884139 to 51884147 8 + TSS region transcription start site region 101295
Tssr101296 11 51884265 to 51884284 19 + TSS region transcription start site region 101296