Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:5123921-5425926

Filter by:
35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Emid1 11 5106265 to 5152257 45992 - protein coding gene EMI domain containing 1
Gm46266 11 5112392 to 5131907 19515 + lncRNA gene predicted gene, 46266
Tssr106610 11 5129220 to 5129260 40 - TSS region transcription start site region 106610
Gm39572 11 5136186 to 5137082 896 + lncRNA gene predicted gene, 39572
Tssr100171 11 5136238 to 5136254 16 + TSS region transcription start site region 100171
Tssr100172 11 5136258 to 5136283 25 + TSS region transcription start site region 100172
Tssr100173 11 5146570 to 5146618 48 + TSS region transcription start site region 100173
Tssr106611 11 5150062 to 5150094 32 - TSS region transcription start site region 106611
Cpgi2531 11 5151787 to 5152842 1055 CpG island CpG island 2531
Tssr106612 11 5152218 to 5152272 54 - TSS region transcription start site region 106612
Tssr106613 11 5177225 to 5177230 5 - TSS region transcription start site region 106613
D11Dcr3 11 5180568 to 5180681 113 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 3
Gm18478 11 5187863 to 5188467 604 + pseudogene predicted gene, 18478
Kremen1 11 5191552 to 5261558 70006 - protein coding gene kringle containing transmembrane protein 1
Tssr100174 11 5196005 to 5196012 7 + TSS region transcription start site region 100174
Tssr3418 11 5229795 to 5229807 12 - TSS region transcription start site region 3418
Gm25142 11 5251850 to 5251956 106 + snRNA gene predicted gene, 25142
Tssr106614 11 5253712 to 5253722 10 - TSS region transcription start site region 106614
Gm46268 11 5260481 to 5268799 8318 + lncRNA gene predicted gene, 46268
Cpgi2532 11 5260973 to 5262323 1350 CpG island CpG island 2532
Tssr106615 11 5261530 to 5261543 13 - TSS region transcription start site region 106615
Tssr106616 11 5261569 to 5261637 68 - TSS region transcription start site region 106616
Tssr106617 11 5261710 to 5261721 11 - TSS region transcription start site region 106617
Tssr106618 11 5261722 to 5261754 32 - TSS region transcription start site region 106618
Cpgi2533 11 5263071 to 5263362 291 CpG island CpG island 2533
Gm30172 11 5273921 to 5275926 2005 + protein coding gene predicted gene, 30172
Znrf3 11 5276329 to 5444847 168518 - protein coding gene zinc and ring finger 3
Tssr106619 11 5277561 to 5277567 6 - TSS region transcription start site region 106619
BC025031 11 5313002 to 5315603 2601 unclassified gene cDNA sequence BC025031
D11Mit74 11 5326905 to 5327122 217 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 74
Tssr106620 11 5381734 to 5381745 11 - TSS region transcription start site region 106620
Tssr106621 11 5390914 to 5390920 6 - TSS region transcription start site region 106621
Tssr106622 11 5394429 to 5394433 4 - TSS region transcription start site region 106622
Tssr106623 11 5401276 to 5401282 6 - TSS region transcription start site region 106623
Tssr106624 11 5421562 to 5421566 4 - TSS region transcription start site region 106624