MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:5089053-5109081

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ewsr1	11	5069687 to 5099099	29412	-	protein coding gene	Ewing sarcoma breakpoint region 1
Cpgi2530	11	5098233 to 5100126	1893		CpG island	CpG island 2530
Tssr106603	11	5098750 to 5098759	9	-	TSS region	transcription start site region 106603
Tssr100164	11	5098915 to 5098926	11	+	TSS region	transcription start site region 100164
Tssr106604	11	5099036 to 5099050	14	-	TSS region	transcription start site region 106604
Tssr106605	11	5099053 to 5099081	28	-	TSS region	transcription start site region 106605
Tssr106606	11	5099084 to 5099095	11	-	TSS region	transcription start site region 106606
Rhbdd3	11	5099187 to 5106100	6913	+	protein coding gene	rhomboid domain containing 3
Tssr106607	11	5099223 to 5099242	19	-	TSS region	transcription start site region 106607
Tssr100165	11	5099266 to 5099279	13	+	TSS region	transcription start site region 100165
Tssr106608	11	5099323 to 5099356	33	-	TSS region	transcription start site region 106608
Tssr100166	11	5099406 to 5099518	112	+	TSS region	transcription start site region 100166
Tssr100167	11	5099626 to 5099646	20	+	TSS region	transcription start site region 100167
Tssr100168	11	5099659 to 5099677	18	+	TSS region	transcription start site region 100168
Gm46267	11	5099967 to 5101417	1450	-	lncRNA gene	predicted gene, 46267
Tssr100169	11	5105177 to 5105187	10	+	TSS region	transcription start site region 100169
Tssr100170	11	5105214 to 5105221	7	+	TSS region	transcription start site region 100170
Emid1	11	5106265 to 5152257	45992	-	protein coding gene	EMI domain containing 1