Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:50377780-50720704

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2816 11 50376806 to 50378881 2075 CpG island CpG island 2816
Hnrnph1 11 50377694 to 50386528 8834 + protein coding gene heterogeneous nuclear ribonucleoprotein H1
Tssr101253 11 50378010 to 50378046 36 + TSS region transcription start site region 101253
Tssr101254 11 50378372 to 50378388 16 + TSS region transcription start site region 101254
Tssr101255 11 50381504 to 50381552 48 + TSS region transcription start site region 101255
Tssr101256 11 50382793 to 50382816 23 + TSS region transcription start site region 101256
Tssr101257 11 50383016 to 50383028 12 + TSS region transcription start site region 101257
Rufy1 11 50389286 to 50431125 41839 - protein coding gene RUN and FYVE domain containing 1
Tssr107773 11 50408007 to 50408022 15 - TSS region transcription start site region 107773
Tssr107774 11 50415726 to 50415732 6 - TSS region transcription start site region 107774
Cpgi2817 11 50421843 to 50422071 228 CpG island CpG island 2817
Tssr107775 11 50422002 to 50422062 60 - TSS region transcription start site region 107775
Cpgi2818 11 50430327 to 50431702 1375 CpG island CpG island 2818
Tssr101258 11 50430387 to 50430426 39 + TSS region transcription start site region 101258
Tssr107776 11 50431101 to 50431131 30 - TSS region transcription start site region 107776
Tssr107777 11 50431288 to 50431321 33 - TSS region transcription start site region 107777
Gm23824 11 50510902 to 50511177 275 - unclassified non-coding RNA gene predicted gene, 23824
Tssr3487 11 50543871 to 50543875 4 + TSS region transcription start site region 3487
Gm36763 11 50544898 to 50547717 2819 + lncRNA gene predicted gene, 36763
Gm46259 11 50547780 to 50550704 2924 + lncRNA gene predicted gene, 46259
Tssr107778 11 50557087 to 50557103 16 - TSS region transcription start site region 107778
Gm12198 11 50599298 to 50602448 3150 - unclassified non-coding RNA gene predicted gene 12198
Cpgi2819 11 50601401 to 50603751 2350 CpG island CpG island 2819
Tssr101259 11 50602007 to 50602067 60 + TSS region transcription start site region 101259
Tssr101260 11 50602072 to 50602094 22 + TSS region transcription start site region 101260
Adamts2 11 50602085 to 50807573 205488 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2
Tssr101261 11 50602099 to 50602106 7 + TSS region transcription start site region 101261
Tssr101262 11 50603369 to 50603380 11 + TSS region transcription start site region 101262
Tssr101263 11 50611296 to 50611298 2 + TSS region transcription start site region 101263
Gm39819 11 50697889 to 50711567 13678 + lncRNA gene predicted gene, 39819
Gm12199 11 50717670 to 50718915 1245 - antisense lncRNA gene predicted gene 12199
Tssr107779 11 50718841 to 50718853 12 - TSS region transcription start site region 107779
Gm12200 11 50720082 to 50725544 5462 - antisense lncRNA gene predicted gene 12200