Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:50372002-50472062

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi2816	11	50376806 to 50378881	2075		CpG island	CpG island 2816
Tssr101247	11	50376911 to 50376924	13	+	TSS region	transcription start site region 101247
Tssr107771	11	50376958 to 50376967	9	-	TSS region	transcription start site region 107771
Tssr101248	11	50376982 to 50377004	22	+	TSS region	transcription start site region 101248
Tssr101249	11	50377013 to 50377024	11	+	TSS region	transcription start site region 101249
Tssr101250	11	50377047 to 50377063	16	+	TSS region	transcription start site region 101250
Tssr101251	11	50377069 to 50377086	17	+	TSS region	transcription start site region 101251
Tssr107772	11	50377603 to 50377647	44	-	TSS region	transcription start site region 107772
Hnrnph1	11	50377694 to 50386528	8834	+	protein coding gene	heterogeneous nuclear ribonucleoprotein H1
Tssr101252	11	50377757 to 50377779	22	+	TSS region	transcription start site region 101252
Tssr101253	11	50378010 to 50378046	36	+	TSS region	transcription start site region 101253
Tssr101254	11	50378372 to 50378388	16	+	TSS region	transcription start site region 101254
Tssr101255	11	50381504 to 50381552	48	+	TSS region	transcription start site region 101255
Tssr101256	11	50382793 to 50382816	23	+	TSS region	transcription start site region 101256
Tssr101257	11	50383016 to 50383028	12	+	TSS region	transcription start site region 101257
Rufy1	11	50389286 to 50431125	41839	-	protein coding gene	RUN and FYVE domain containing 1
Tssr107773	11	50408007 to 50408022	15	-	TSS region	transcription start site region 107773
Tssr107774	11	50415726 to 50415732	6	-	TSS region	transcription start site region 107774
Cpgi2817	11	50421843 to 50422071	228		CpG island	CpG island 2817
Tssr107775	11	50422002 to 50422062	60	-	TSS region	transcription start site region 107775
Cpgi2818	11	50430327 to 50431702	1375		CpG island	CpG island 2818
Tssr101258	11	50430387 to 50430426	39	+	TSS region	transcription start site region 101258
Tssr107776	11	50431101 to 50431131	30	-	TSS region	transcription start site region 107776
Tssr107777	11	50431288 to 50431321	33	-	TSS region	transcription start site region 107777