Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Pwbwq14 | 11 | 23497210 | QTL | post-weaning body weight QTL 14 | ||
Pwgrq20 | 11 | 23497210 | QTL | post-weaning growth rate QTL 20 | ||
Pwbwq16 | 11 | 23497210 | QTL | post-weaning body weight QTL 16 | ||
Pwbwq15 | 11 | 23497210 | QTL | post-weaning body weight QTL 15 | ||
Ogrq5 | 11 | 23497210 | QTL | overall growth rate QTL 5 | ||
Mgat4b | 11 | 9768 | + | protein coding gene | mannoside acetylglucosaminyltransferase 4, isoenzyme B | |
Cpgi2809 | 11 | 185 | CpG island | CpG island 2809 | ||
Cpgi2810 | 11 | 1447 | CpG island | CpG island 2810 | ||
Ltc4s | 11 | 2071 | - | protein coding gene | leukotriene C4 synthase | |
Tssr101237 | 11 | 20 | + | TSS region | transcription start site region 101237 | |
Tssr101238 | 11 | 30 | + | TSS region | transcription start site region 101238 | |
Gm26542 | 11 | 51886 | + | antisense lncRNA gene | predicted gene, 26542 | |
Tssr101239 | 11 | 12 | + | TSS region | transcription start site region 101239 | |
Tssr107742 | 11 | 18 | - | TSS region | transcription start site region 107742 | |
Tssr107743 | 11 | 42 | - | TSS region | transcription start site region 107743 | |
Tssr101240 | 11 | 16 | + | TSS region | transcription start site region 101240 | |
Tssr107744 | 11 | 10 | - | TSS region | transcription start site region 107744 | |
Cpgi2811 | 11 | 217 | CpG island | CpG island 2811 | ||
Maml1 | 11 | 36677 | - | protein coding gene | mastermind like transcriptional coactivator 1 | |
Tssr107745 | 11 | 3 | - | TSS region | transcription start site region 107745 | |
Tssr101241 | 11 | 19 | + | TSS region | transcription start site region 101241 | |
Cpgi2812 | 11 | 1271 | CpG island | CpG island 2812 | ||
Tssr107746 | 11 | 61 | - | TSS region | transcription start site region 107746 | |
Tssr101242 | 11 | 46 | + | TSS region | transcription start site region 101242 | |
Canx | 11 | 31712 | - | protein coding gene | calnexin | |
Tssr107747 | 11 | 15 | - | TSS region | transcription start site region 107747 | |
Tssr107748 | 11 | 73 | - | TSS region | transcription start site region 107748 | |
Tssr107749 | 11 | 11 | - | TSS region | transcription start site region 107749 | |
Tssr107750 | 11 | 49 | - | TSS region | transcription start site region 107750 | |
Tssr101243 | 11 | 24 | + | TSS region | transcription start site region 101243 | |
Tssr107751 | 11 | 30 | - | TSS region | transcription start site region 107751 | |
Tssr107752 | 11 | 73 | - | TSS region | transcription start site region 107752 | |
Tssr107753 | 11 | 34 | - | TSS region | transcription start site region 107753 | |
Tssr107754 | 11 | 16 | - | TSS region | transcription start site region 107754 | |
Tssr107755 | 11 | 62 | - | TSS region | transcription start site region 107755 | |
Tssr107756 | 11 | 15 | - | TSS region | transcription start site region 107756 | |
Tssr107757 | 11 | 39 | - | TSS region | transcription start site region 107757 | |
D11Pjn2 | 11 | 389 | DNA segment | DNA segment, Chr 11, Patsy J. Nishina 2 | ||
Tssr107758 | 11 | 57 | - | TSS region | transcription start site region 107758 | |
Tssr107759 | 11 | 30 | - | TSS region | transcription start site region 107759 | |
Tssr107760 | 11 | 15 | - | TSS region | transcription start site region 107760 | |
Tssr107761 | 11 | 13 | - | TSS region | transcription start site region 107761 | |
Tssr107762 | 11 | 25 | - | TSS region | transcription start site region 107762 | |
Tssr107763 | 11 | 27 | - | TSS region | transcription start site region 107763 | |
Tssr107764 | 11 | 22 | - | TSS region | transcription start site region 107764 | |
Tssr107765 | 11 | 45 | - | TSS region | transcription start site region 107765 | |
Tssr107766 | 11 | 13 | - | TSS region | transcription start site region 107766 | |
Cpgi2813 | 11 | 987 | CpG island | CpG island 2813 | ||
Tssr107767 | 11 | 10 | - | TSS region | transcription start site region 107767 | |
Tssr107768 | 11 | 67 | - | TSS region | transcription start site region 107768 | |
Gm46280 | 11 | 1436 | + | lncRNA gene | predicted gene, 46280 | |
Tssr101244 | 11 | 23 | + | TSS region | transcription start site region 101244 | |
Tssr101245 | 11 | 49 | + | TSS region | transcription start site region 101245 | |
Tssr107769 | 11 | 3 | - | TSS region | transcription start site region 107769 | |
Tssr107770 | 11 | 12 | - | TSS region | transcription start site region 107770 | |
Gm31865 | 11 | 1002 | + | pseudogene | predicted gene, 31865 | |
Gm12196 | 11 | 261 | + | pseudogene | predicted gene 12196 | |
Cby3 | 11 | 5237 | + | protein coding gene | chibby family member 3 | |
Tssr101246 | 11 | 14 | + | TSS region | transcription start site region 101246 | |
Mir804 | 11 | 94 | - | miRNA gene | microRNA 804 | |
Cpgi2814 | 11 | 968 | CpG island | CpG island 2814 | ||
Cpgi2815 | 11 | 273 | CpG island | CpG island 2815 | ||
Cpgi2816 | 11 | 2075 | CpG island | CpG island 2816 | ||
Tssr101247 | 11 | 13 | + | TSS region | transcription start site region 101247 | |
Tssr107771 | 11 | 9 | - | TSS region | transcription start site region 107771 | |
Tssr101248 | 11 | 22 | + | TSS region | transcription start site region 101248 | |
Tssr101249 | 11 | 11 | + | TSS region | transcription start site region 101249 | |
Tssr101250 | 11 | 16 | + | TSS region | transcription start site region 101250 | |
Tssr101251 | 11 | 17 | + | TSS region | transcription start site region 101251 | |
Tssr107772 | 11 | 44 | - | TSS region | transcription start site region 107772 | |
Hnrnph1 | 11 | 8834 | + | protein coding gene | heterogeneous nuclear ribonucleoprotein H1 | |
Tssr101252 | 11 | 22 | + | TSS region | transcription start site region 101252 | |
Tssr101253 | 11 | 36 | + | TSS region | transcription start site region 101253 | |
Tssr101254 | 11 | 16 | + | TSS region | transcription start site region 101254 | |
Tssr101255 | 11 | 48 | + | TSS region | transcription start site region 101255 | |
Tssr101256 | 11 | 23 | + | TSS region | transcription start site region 101256 | |
Tssr101257 | 11 | 12 | + | TSS region | transcription start site region 101257 | |
Rufy1 | 11 | 41839 | - | protein coding gene | RUN and FYVE domain containing 1 | |
Tssr107773 | 11 | 15 | - | TSS region | transcription start site region 107773 | |
Tssr107774 | 11 | 6 | - | TSS region | transcription start site region 107774 | |
Cpgi2817 | 11 | 228 | CpG island | CpG island 2817 | ||
Tssr107775 | 11 | 60 | - | TSS region | transcription start site region 107775 | |
Cpgi2818 | 11 | 1375 | CpG island | CpG island 2818 | ||
Tssr101258 | 11 | 39 | + | TSS region | transcription start site region 101258 | |
Tssr107776 | 11 | 30 | - | TSS region | transcription start site region 107776 | |
Tssr107777 | 11 | 33 | - | TSS region | transcription start site region 107777 | |
Gm23824 | 11 | 275 | - | unclassified non-coding RNA gene | predicted gene, 23824 | |
Tssr3487 | 11 | 4 | + | TSS region | transcription start site region 3487 | |
Gm36763 | 11 | 2819 | + | lncRNA gene | predicted gene, 36763 | |
Gm46259 | 11 | 2924 | + | lncRNA gene | predicted gene, 46259 | |
Tssr107778 | 11 | 16 | - | TSS region | transcription start site region 107778 | |
Gm12198 | 11 | 3150 | - | unclassified non-coding RNA gene | predicted gene 12198 | |
Cpgi2819 | 11 | 2350 | CpG island | CpG island 2819 | ||
Tssr101259 | 11 | 60 | + | TSS region | transcription start site region 101259 | |
Tssr101260 | 11 | 22 | + | TSS region | transcription start site region 101260 | |
Adamts2 | 11 | 205488 | + | protein coding gene | a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2 | |
Tssr101261 | 11 | 7 | + | TSS region | transcription start site region 101261 | |
Tssr101262 | 11 | 11 | + | TSS region | transcription start site region 101262 | |
Tssr101263 | 11 | 2 | + | TSS region | transcription start site region 101263 | |
Gm39819 | 11 | 13678 | + | lncRNA gene | predicted gene, 39819 | |
Gm12199 | 11 | 1245 | - | antisense lncRNA gene | predicted gene 12199 | |
Tssr107779 | 11 | 12 | - | TSS region | transcription start site region 107779 | |
Gm12200 | 11 | 5462 | - | antisense lncRNA gene | predicted gene 12200 | |
Tssr107780 | 11 | 31 | - | TSS region | transcription start site region 107780 | |
Tssr101264 | 11 | 1 | + | TSS region | transcription start site region 101264 | |
Tssr101265 | 11 | 13 | + | TSS region | transcription start site region 101265 | |
Tssr101266 | 11 | 17 | + | TSS region | transcription start site region 101266 | |
Tssr101267 | 11 | 50 | + | TSS region | transcription start site region 101267 | |
Cpgi2820 | 11 | 440 | CpG island | CpG island 2820 | ||
Cpgi2821 | 11 | 245 | CpG island | CpG island 2821 | ||
Gm23392 | 11 | 112 | + | rRNA gene | predicted gene, 23392 | |
Tssr101268 | 11 | 3 | + | TSS region | transcription start site region 101268 | |
Zfp354c | 11 | 16638 | - | protein coding gene | zinc finger protein 354C | |
Cpgi2822 | 11 | 863 | CpG island | CpG island 2822 | ||
Tssr107781 | 11 | 7 | - | TSS region | transcription start site region 107781 | |
Tssr107782 | 11 | 61 | - | TSS region | transcription start site region 107782 | |
Zfp879 | 11 | 9521 | - | protein coding gene | zinc finger protein 879 | |
Cpgi2823 | 11 | 224 | CpG island | CpG island 2823 | ||
Grm6 | 11 | 15523 | + | protein coding gene | glutamate receptor, metabotropic 6 | |
Cpgi2824 | 11 | 1218 | CpG island | CpG island 2824 | ||
Tssr101269 | 11 | 17 | + | TSS region | transcription start site region 101269 | |
Gm12660 | 11 | 1250 | - | antisense lncRNA gene | predicted gene 12660 | |
Cpgi2825 | 11 | 671 | CpG island | CpG island 2825 | ||
Cpgi2826 | 11 | 265 | CpG island | CpG island 2826 | ||
D11Pjn3 | 11 | 365 | DNA segment | DNA segment, Chr 11, Patsy J. Nishina 3 | ||
Zfp454 | 11 | 14917 | - | protein coding gene | zinc finger protein 454 | |
Cpgi2827 | 11 | 379 | CpG island | CpG island 2827 | ||
Tssr107783 | 11 | 62 | - | TSS region | transcription start site region 107783 | |
Zfp2 | 11 | 17453 | - | protein coding gene | zinc finger protein 2 | |
Cpgi2828 | 11 | 627 | CpG island | CpG island 2828 | ||
Tssr107784 | 11 | 43 | - | TSS region | transcription start site region 107784 | |
Zfp354b | 11 | 9810 | - | protein coding gene | zinc finger protein 354B | |
Cpgi2829 | 11 | 588 | CpG island | CpG island 2829 | ||
Tssr107785 | 11 | 30 | - | TSS region | transcription start site region 107785 | |
4933414I15Rik | 11 | 3014 | - | protein coding gene | RIKEN cDNA 4933414I15 gene | |
Tssr107786 | 11 | 43 | - | TSS region | transcription start site region 107786 | |
Tssr107787 | 11 | 4 | - | TSS region | transcription start site region 107787 | |
Tssr107788 | 11 | 5 | - | TSS region | transcription start site region 107788 | |
4930428B07Rik | 11 | 649 | unclassified gene | RIKEN cDNA 4930428B07 gene | ||
Prop1 | 11 | 2826 | - | protein coding gene | paired like homeodomain factor 1 | |
Cpgi2830 | 11 | 315 | CpG island | CpG island 2830 | ||
Tssr107789 | 11 | 23 | - | TSS region | transcription start site region 107789 | |
Olfr1379-ps1 | 11 | 939 | + | pseudogene | olfactory receptor 1379, pseudogene 1 | |
Olfr1378 | 11 | 947 | + | protein coding gene | olfactory receptor 1378 | |
Gm12661 | 11 | 2751 | + | pseudogene | predicted gene 12661 | |
Olfr1377 | 11 | 923 | + | protein coding gene | olfactory receptor 1377 | |
Olfr1376-ps1 | 11 | 906 | + | pseudogene | olfactory receptor 1376, pseudogene 1 | |
Olfr51 | 11 | 923 | + | protein coding gene | olfactory receptor 51 | |
Olfr54 | 11 | 941 | + | protein coding gene | olfactory receptor 54 | |
Olfr1375 | 11 | 941 | + | protein coding gene | olfactory receptor 1375 | |
Cpgi2831 | 11 | 534 | CpG island | CpG island 2831 | ||
Tssr101270 | 11 | 76 | + | TSS region | transcription start site region 101270 | |
Zfp354a | 11 | 13542 | + | protein coding gene | zinc finger protein 354A | |
9230009I02Rik | 11 | 6746 | + | lincRNA gene | RIKEN cDNA 9230009I02 gene | |
Gm12201 | 11 | 1238 | + | pseudogene | predicted gene 12201 | |
Gm12202 | 11 | 2649 | - | pseudogene | predicted gene 12202 | |
Olfr1374-ps1 | 11 | 632 | + | pseudogene | olfactory receptor 1374, pseudogene 1 | |
Gm12203 | 11 | 597 | - | pseudogene | predicted gene 12203 | |
Cpgi2832 | 11 | 223 | CpG island | CpG island 2832 | ||
Platr20 | 11 | 30585 | - | lincRNA gene | pluripotency associated transcript 20 | |
Tssr107790 | 11 | 35 | - | TSS region | transcription start site region 107790 | |
Gm12569 | 11 | 14580 | + | protein coding gene | predicted gene 12569 | |
Tssr101271 | 11 | 26 | + | TSS region | transcription start site region 101271 | |
Tssr101272 | 11 | 7 | + | TSS region | transcription start site region 101272 | |
BC049762 | 11 | 9395 | - | protein coding gene | cDNA sequence BC049762 | |
Tssr101273 | 11 | 12 | + | TSS region | transcription start site region 101273 | |
Tssr101274 | 11 | 27 | + | TSS region | transcription start site region 101274 | |
Cpgi2833 | 11 | 1238 | CpG island | CpG island 2833 | ||
Tssr107791 | 11 | 13 | - | TSS region | transcription start site region 107791 | |
Tssr107792 | 11 | 28 | - | TSS region | transcription start site region 107792 | |
Tssr101275 | 11 | 9 | + | TSS region | transcription start site region 101275 | |
Tssr107793 | 11 | 24 | - | TSS region | transcription start site region 107793 | |
Tssr107794 | 11 | 18 | - | TSS region | transcription start site region 107794 | |
Tssr107795 | 11 | 19 | - | TSS region | transcription start site region 107795 | |
Clk4 | 11 | 18656 | + | protein coding gene | CDC like kinase 4 | |
Tssr101276 | 11 | 76 | + | TSS region | transcription start site region 101276 | |
Gm25082 | 11 | 254 | + | unclassified non-coding RNA gene | predicted gene, 25082 | |
Cpgi2834 | 11 | 1332 | CpG island | CpG island 2834 | ||
Tssr101277 | 11 | 16 | + | TSS region | transcription start site region 101277 | |
Col23a1 | 11 | 293998 | + | protein coding gene | collagen, type XXIII, alpha 1 | |
Tssr101278 | 11 | 43 | + | TSS region | transcription start site region 101278 | |
Tssr101279 | 11 | 11 | + | TSS region | transcription start site region 101279 | |
D11Jcs12 | 11 | 256 | DNA segment | DNA segment, Chr 11, John C. Schimenti 12 | ||
D11Mit314 | 11 | 123 | DNA segment | DNA Segment, Chr 11, Massachusetts Institute of Technology 314 | ||
Tcpm1 | 11 | 2163451 | QTL | T cell phenotype modifier 1 | ||
Tssr101280 | 11 | 6 | + | TSS region | transcription start site region 101280 | |
Tssr107796 | 11 | 14 | - | TSS region | transcription start site region 107796 | |
Cpgi2835 | 11 | 1045 | CpG island | CpG island 2835 | ||
Phykpl | 11 | 18731 | + | protein coding gene | 5-phosphohydroxy-L-lysine phospholyase | |
Tssr107797 | 11 | 46 | - | TSS region | transcription start site region 107797 | |
Tssr101281 | 11 | 62 | + | TSS region | transcription start site region 101281 | |
Hnrnpab | 11 | 6747 | - | protein coding gene | heterogeneous nuclear ribonucleoprotein A/B | |
Tssr107798 | 11 | 45 | - | TSS region | transcription start site region 107798 | |
Tssr107799 | 11 | 20 | - | TSS region | transcription start site region 107799 | |
Tssr107800 | 11 | 18 | - | TSS region | transcription start site region 107800 | |
Tssr107801 | 11 | 31 | - | TSS region | transcription start site region 107801 | |
Tssr107802 | 11 | 4 | - | TSS region | transcription start site region 107802 | |
Tssr107803 | 11 | 22 | - | TSS region | transcription start site region 107803 | |
Tssr101282 | 11 | 20 | + | TSS region | transcription start site region 101282 | |
Tssr107804 | 11 | 14 | - | TSS region | transcription start site region 107804 |