Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:50233218-50363248

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mgat4b 11 50225335 to 50235103 9768 + protein coding gene mannoside acetylglucosaminyltransferase 4, isoenzyme B
Cpgi2809 11 50234661 to 50234846 185 CpG island CpG island 2809
Cpgi2810 11 50236364 to 50237811 1447 CpG island CpG island 2810
Ltc4s 11 50236461 to 50238532 2071 - protein coding gene leukotriene C4 synthase
Tssr101237 11 50236850 to 50236870 20 + TSS region transcription start site region 101237
Tssr101238 11 50236887 to 50236917 30 + TSS region transcription start site region 101238
Gm26542 11 50236953 to 50288839 51886 + antisense lncRNA gene predicted gene, 26542
Tssr101239 11 50237002 to 50237014 12 + TSS region transcription start site region 101239
Tssr107742 11 50238451 to 50238469 18 - TSS region transcription start site region 107742
Tssr107743 11 50238480 to 50238522 42 - TSS region transcription start site region 107743
Tssr101240 11 50252438 to 50252454 16 + TSS region transcription start site region 101240
Tssr107744 11 50252854 to 50252864 10 - TSS region transcription start site region 107744
Cpgi2811 11 50254057 to 50254274 217 CpG island CpG island 2811
Maml1 11 50255634 to 50292311 36677 - protein coding gene mastermind like transcriptional coactivator 1
Tssr107745 11 50278680 to 50278683 3 - TSS region transcription start site region 107745
Tssr101241 11 50291117 to 50291136 19 + TSS region transcription start site region 101241
Cpgi2812 11 50291335 to 50292606 1271 CpG island CpG island 2812
Tssr107746 11 50292302 to 50292363 61 - TSS region transcription start site region 107746
Tssr101242 11 50292470 to 50292516 46 + TSS region transcription start site region 101242
Canx 11 50293961 to 50325673 31712 - protein coding gene calnexin
Tssr107747 11 50295941 to 50295956 15 - TSS region transcription start site region 107747
Tssr107748 11 50296000 to 50296073 73 - TSS region transcription start site region 107748
Tssr107749 11 50296202 to 50296213 11 - TSS region transcription start site region 107749
Tssr107750 11 50298163 to 50298212 49 - TSS region transcription start site region 107750
Tssr101243 11 50298163 to 50298187 24 + TSS region transcription start site region 101243
Tssr107751 11 50298218 to 50298248 30 - TSS region transcription start site region 107751
Tssr107752 11 50299152 to 50299225 73 - TSS region transcription start site region 107752
Tssr107753 11 50299235 to 50299269 34 - TSS region transcription start site region 107753
Tssr107754 11 50300927 to 50300943 16 - TSS region transcription start site region 107754
Tssr107755 11 50300950 to 50301012 62 - TSS region transcription start site region 107755
Tssr107756 11 50301016 to 50301031 15 - TSS region transcription start site region 107756
Tssr107757 11 50301788 to 50301827 39 - TSS region transcription start site region 107757
D11Pjn2 11 50306133 to 50306522 389 DNA segment DNA segment, Chr 11, Patsy J. Nishina 2
Tssr107758 11 50307567 to 50307624 57 - TSS region transcription start site region 107758
Tssr107759 11 50307641 to 50307671 30 - TSS region transcription start site region 107759
Tssr107760 11 50308816 to 50308831 15 - TSS region transcription start site region 107760
Tssr107761 11 50308850 to 50308863 13 - TSS region transcription start site region 107761
Tssr107762 11 50308866 to 50308891 25 - TSS region transcription start site region 107762
Tssr107763 11 50310408 to 50310435 27 - TSS region transcription start site region 107763
Tssr107764 11 50310820 to 50310842 22 - TSS region transcription start site region 107764
Tssr107765 11 50311735 to 50311780 45 - TSS region transcription start site region 107765
Tssr107766 11 50313617 to 50313630 13 - TSS region transcription start site region 107766
Cpgi2813 11 50325175 to 50326162 987 CpG island CpG island 2813
Tssr107767 11 50325579 to 50325589 10 - TSS region transcription start site region 107767
Tssr107768 11 50325599 to 50325666 67 - TSS region transcription start site region 107768
Gm46280 11 50325720 to 50327156 1436 + lncRNA gene predicted gene, 46280
Tssr101244 11 50325874 to 50325897 23 + TSS region transcription start site region 101244
Tssr101245 11 50325900 to 50325949 49 + TSS region transcription start site region 101245
Tssr107769 11 50326080 to 50326083 3 - TSS region transcription start site region 107769
Tssr107770 11 50326095 to 50326107 12 - TSS region transcription start site region 107770
Gm31865 11 50337265 to 50338267 1002 + pseudogene predicted gene, 31865
Gm12196 11 50347628 to 50347889 261 + pseudogene predicted gene 12196
Cby3 11 50354462 to 50359699 5237 + protein coding gene chibby family member 3
Tssr101246 11 50357759 to 50357773 14 + TSS region transcription start site region 101246
Mir804 11 50357785 to 50357879 94 - miRNA gene microRNA 804
Cpgi2814 11 50358905 to 50359873 968 CpG island CpG island 2814