Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:50051907-50202918

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf130 11 50025346 to 50104758 79412 + protein coding gene ring finger protein 130
B130040O20Rik 11 50063853 to 50067411 3558 unclassified non-coding RNA gene RIKEN cDNA B130040O20 gene
Mir340 11 50069702 to 50069799 97 + miRNA gene microRNA 340
Tssr101211 11 50071206 to 50071219 13 + TSS region transcription start site region 101211
Tssr101212 11 50119592 to 50119608 16 + TSS region transcription start site region 101212
Gm12194 11 50126907 to 50127918 1011 - pseudogene predicted gene 12194
Tssr107709 11 50128131 to 50128140 9 - TSS region transcription start site region 107709
Cpgi2804 11 50130919 to 50131928 1009 CpG island CpG island 2804
Tssr101213 11 50131013 to 50131051 38 + TSS region transcription start site region 101213
Tssr101214 11 50131317 to 50131335 18 + TSS region transcription start site region 101214
Tssr101215 11 50131342 to 50131426 84 + TSS region transcription start site region 101215
Tbc1d9b 11 50131396 to 50172785 41389 + protein coding gene TBC1 domain family, member 9B
Tssr3486 11 50131428 to 50131446 18 + TSS region transcription start site region 3486
Tssr101216 11 50132002 to 50132029 27 + TSS region transcription start site region 101216
Gm12195 11 50134082 to 50135004 922 - antisense lncRNA gene predicted gene 12195
Tssr101217 11 50134399 to 50134421 22 + TSS region transcription start site region 101217
Tssr107710 11 50139726 to 50139744 18 - TSS region transcription start site region 107710
Tssr101218 11 50147915 to 50147917 2 + TSS region transcription start site region 101218
Tssr101219 11 50160250 to 50160254 4 + TSS region transcription start site region 101219
Cpgi2805 11 50174413 to 50175089 676 CpG island CpG island 2805
Tssr101220 11 50174839 to 50174884 45 + TSS region transcription start site region 101220
Mrnip 11 50174851 to 50200116 25265 + protein coding gene MRN complex interacting protein
Sqstm1 11 50200152 to 50210820 10668 - protein coding gene sequestosome 1
Tssr101221 11 50200441 to 50200460 19 + TSS region transcription start site region 101221
Tssr107711 11 50200520 to 50200541 21 - TSS region transcription start site region 107711
Tssr101222 11 50200619 to 50200643 24 + TSS region transcription start site region 101222
Tssr107712 11 50200620 to 50200637 17 - TSS region transcription start site region 107712
Tssr101223 11 50200655 to 50200676 21 + TSS region transcription start site region 101223
Tssr107713 11 50200719 to 50200734 15 - TSS region transcription start site region 107713
Tssr107714 11 50200739 to 50200790 51 - TSS region transcription start site region 107714
Tssr107715 11 50200830 to 50200842 12 - TSS region transcription start site region 107715
Tssr107716 11 50200872 to 50200903 31 - TSS region transcription start site region 107716
Tssr107717 11 50200913 to 50200951 38 - TSS region transcription start site region 107717
Tssr107718 11 50202425 to 50202439 14 - TSS region transcription start site region 107718
Tssr107719 11 50202467 to 50202481 14 - TSS region transcription start site region 107719
Tssr107720 11 50202504 to 50202513 9 - TSS region transcription start site region 107720
Tssr101224 11 50202810 to 50202860 50 + TSS region transcription start site region 101224
Tssr107721 11 50202872 to 50202891 19 - TSS region transcription start site region 107721