Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:49796200-50007872

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36507 11 49789436 to 49823781 34345 - lncRNA gene predicted gene, 36507
Gfpt2 11 49794178 to 49838613 44435 + protein coding gene glutamine fructose-6-phosphate transaminase 2
D11Mit153 11 49822001 to 49822176 175 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 153
Tssr101197 11 49826715 to 49826725 10 + TSS region transcription start site region 101197
Cpgi2801 11 49846245 to 49847494 1249 CpG island CpG island 2801
Tssr101198 11 49846732 to 49846758 26 + TSS region transcription start site region 101198
Mapk9 11 49846751 to 49886421 39670 + protein coding gene mitogen-activated protein kinase 9
Tssr101199 11 49846764 to 49846799 35 + TSS region transcription start site region 101199
Tssr101200 11 49846805 to 49846814 9 + TSS region transcription start site region 101200
Tssr101201 11 49846884 to 49846937 53 + TSS region transcription start site region 101201
Tssr3485 11 49846938 to 49846949 11 + TSS region transcription start site region 3485
Gm23492 11 49895731 to 49895845 114 + miRNA gene predicted gene, 23492
Cpgi2802 11 49901200 to 49902872 1672 CpG island CpG island 2802
Tssr101202 11 49901803 to 49901895 92 + TSS region transcription start site region 101202
Rasgef1c 11 49901816 to 49980223 78407 + protein coding gene RasGEF domain family, member 1C
D11Mit348 11 49982937 to 49983060 123 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 348
Tssr101203 11 49983067 to 49983094 27 + TSS region transcription start site region 101203
Tssr101204 11 49983101 to 49983121 20 + TSS region transcription start site region 101204