Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:49741764-49951799

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23813 11 49771833 to 49771909 76 + miRNA gene predicted gene, 23813
Gm12193 11 49776499 to 49776877 378 + pseudogene predicted gene 12193
Gm36507 11 49789436 to 49823781 34345 - lncRNA gene predicted gene, 36507
Cpgi2800 11 49794067 to 49795019 952 CpG island CpG island 2800
Tssr101196 11 49794157 to 49794184 27 + TSS region transcription start site region 101196
Gfpt2 11 49794178 to 49838613 44435 + protein coding gene glutamine fructose-6-phosphate transaminase 2
D11Mit153 11 49822001 to 49822176 175 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 153
Tssr101197 11 49826715 to 49826725 10 + TSS region transcription start site region 101197
Cpgi2801 11 49846245 to 49847494 1249 CpG island CpG island 2801
Tssr101198 11 49846732 to 49846758 26 + TSS region transcription start site region 101198
Mapk9 11 49846751 to 49886421 39670 + protein coding gene mitogen-activated protein kinase 9
Tssr101199 11 49846764 to 49846799 35 + TSS region transcription start site region 101199
Tssr101200 11 49846805 to 49846814 9 + TSS region transcription start site region 101200
Tssr101201 11 49846884 to 49846937 53 + TSS region transcription start site region 101201
Tssr3485 11 49846938 to 49846949 11 + TSS region transcription start site region 3485
Gm23492 11 49895731 to 49895845 114 + miRNA gene predicted gene, 23492
Cpgi2802 11 49901200 to 49902872 1672 CpG island CpG island 2802
Tssr101202 11 49901803 to 49901895 92 + TSS region transcription start site region 101202
Rasgef1c 11 49901816 to 49980223 78407 + protein coding gene RasGEF domain family, member 1C