Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:49660103-49780120

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr101190 11 49663603 to 49663621 18 + TSS region transcription start site region 101190
Scgb3a1 11 49663610 to 49665118 1508 + protein coding gene secretoglobin, family 3A, member 1
Tssr101191 11 49663647 to 49663658 11 + TSS region transcription start site region 101191
Tssr107703 11 49671255 to 49671256 1 - TSS region transcription start site region 107703
Cnot6 11 49671503 to 49712723 41220 - protein coding gene CCR4-NOT transcription complex, subunit 6
Gm12191 11 49678710 to 49679057 347 - pseudogene predicted gene 12191
Tssr107704 11 49679125 to 49679127 2 - TSS region transcription start site region 107704
Gm12192 11 49697880 to 49698366 486 + pseudogene predicted gene 12192
Cpgi2799 11 49711883 to 49713019 1136 CpG island CpG island 2799
Tssr3484 11 49712610 to 49712619 9 - TSS region transcription start site region 3484
Tssr107705 11 49712622 to 49712631 9 - TSS region transcription start site region 107705
Tssr107706 11 49712637 to 49712668 31 - TSS region transcription start site region 107706
Tssr107707 11 49712674 to 49712726 52 - TSS region transcription start site region 107707
Tssr107708 11 49712733 to 49712744 11 - TSS region transcription start site region 107708
Tssr101192 11 49712921 to 49712962 41 + TSS region transcription start site region 101192
Gm36411 11 49714110 to 49727650 13540 + lncRNA gene predicted gene, 36411
Tssr101193 11 49720103 to 49720120 17 + TSS region transcription start site region 101193
Tssr101194 11 49722858 to 49722870 12 + TSS region transcription start site region 101194
Tssr101195 11 49722880 to 49722898 18 + TSS region transcription start site region 101195
Gm23813 11 49771833 to 49771909 76 + miRNA gene predicted gene, 23813
Gm12193 11 49776499 to 49776877 378 + pseudogene predicted gene 12193