Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:49110904-49311641

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr56 11 49050733 to 49135387 84654 + protein coding gene olfactory receptor 56
Olfr1396 11 49112777 to 49113757 980 - protein coding gene olfactory receptor 1396
Tssr107690 11 49119747 to 49119755 8 - TSS region transcription start site region 107690
Olfr1395 11 49148259 to 49149212 953 + protein coding gene olfactory receptor 1395
Olfr1394 11 49160016 to 49160954 938 + protein coding gene olfactory receptor 1394
Btnl9 11 49168325 to 49187089 18764 - protein coding gene butyrophilin-like 9
Cpgi2790 11 49169042 to 49169976 934 CpG island CpG island 2790
Tssr107691 11 49173751 to 49173783 32 - TSS region transcription start site region 107691
Tssr101175 11 49174615 to 49174616 1 + TSS region transcription start site region 101175
Tssr3483 11 49177097 to 49177103 6 + TSS region transcription start site region 3483
Cpgi2791 11 49180583 to 49180858 275 CpG island CpG island 2791
Tssr107692 11 49187052 to 49187076 24 - TSS region transcription start site region 107692
Tssr107693 11 49187079 to 49187088 9 - TSS region transcription start site region 107693
Tssr107694 11 49187092 to 49187105 13 - TSS region transcription start site region 107694
Tssr107695 11 49187110 to 49187124 14 - TSS region transcription start site region 107695
Tssr107696 11 49187135 to 49187146 11 - TSS region transcription start site region 107696
Tssr107697 11 49187168 to 49187195 27 - TSS region transcription start site region 107697
Tssr107698 11 49203207 to 49203231 24 - TSS region transcription start site region 107698
Cpgi2792 11 49203263 to 49203940 677 CpG island CpG island 2792
Tssr101176 11 49203285 to 49203298 13 + TSS region transcription start site region 101176
Zfp62 11 49203292 to 49218816 15524 + protein coding gene zinc finger protein 62
Tssr101177 11 49203314 to 49203344 30 + TSS region transcription start site region 101177
Tssr101178 11 49203465 to 49203524 59 + TSS region transcription start site region 101178
Tssr107699 11 49204257 to 49204283 26 - TSS region transcription start site region 107699
D11Mit139 11 49209750 to 49209867 117 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 139
Lmr31 11 49209750 to 49209867 117 QTL leishmaniasis resistance 31
Gm18583 11 49210904 to 49211641 737 - pseudogene predicted gene, 18583
Tssr101179 11 49212024 to 49212036 12 + TSS region transcription start site region 101179
Cpgi2793 11 49243603 to 49244534 931 CpG island CpG island 2793
Tssr107700 11 49243878 to 49243894 16 - TSS region transcription start site region 107700
Tssr107701 11 49244153 to 49244169 16 - TSS region transcription start site region 107701
Mgat1 11 49244191 to 49263027 18836 + protein coding gene mannoside acetylglucosaminyltransferase 1
Tssr101180 11 49244227 to 49244283 56 + TSS region transcription start site region 101180
Tssr101181 11 49245458 to 49245506 48 + TSS region transcription start site region 101181
Tssr101182 11 49245524 to 49245539 15 + TSS region transcription start site region 101182
Tssr101183 11 49247462 to 49247512 50 + TSS region transcription start site region 101183
Tssr101184 11 49250097 to 49250115 18 + TSS region transcription start site region 101184
Cpgi2794 11 49250359 to 49250999 640 CpG island CpG island 2794
Tssr101185 11 49250542 to 49250572 30 + TSS region transcription start site region 101185
Tssr101186 11 49250583 to 49250597 14 + TSS region transcription start site region 101186
Tssr101187 11 49259040 to 49259051 11 + TSS region transcription start site region 101187
Gm46279 11 49263918 to 49269186 5268 + lncRNA gene predicted gene, 46279
Olfr1393 11 49278304 to 49282769 4465 + protein coding gene olfactory receptor 1393
Olfr1392 11 49293297 to 49294322 1025 + protein coding gene olfactory receptor 1392
D11Mit138 11 49294478 to 49294619 141 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 138