Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:48973234-49203543

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9930111J21Rik1 11 48946150 to 48979381 33231 - protein coding gene RIKEN cDNA 9930111J21 gene 1
Gm42074 11 48977630 to 48991996 14366 + lncRNA gene predicted gene, 42074
Tgtp1 11 48985329 to 48992246 6917 - protein coding gene T cell specific GTPase 1
Tssr107680 11 48992257 to 48992279 22 - TSS region transcription start site region 107680
Tssr107681 11 48992305 to 48992320 15 - TSS region transcription start site region 107681
Tssr107682 11 48994182 to 48994186 4 - TSS region transcription start site region 107682
Gm12186 11 48996674 to 48997713 1039 - pseudogene predicted gene 12186
Tssr107683 11 48997116 to 48997128 12 - TSS region transcription start site region 107683
Tssr107684 11 48997780 to 48997786 6 - TSS region transcription start site region 107684
Tssr107685 11 49017354 to 49017381 27 - TSS region transcription start site region 107685
9930111J21Rik2 11 49037660 to 49051242 13582 - protein coding gene RIKEN cDNA 9930111J21 gene 2
Olfr56 11 49050733 to 49135387 84654 + protein coding gene olfactory receptor 56
Tgtp2 11 49057194 to 49064206 7012 - protein coding gene T cell specific GTPase 2
Tssr107686 11 49064202 to 49064206 4 - TSS region transcription start site region 107686
Gm12187 11 49069696 to 49071070 1374 - pseudogene predicted gene 12187
Tssr101159 11 49076552 to 49076577 25 + TSS region transcription start site region 101159
Tssr101160 11 49076584 to 49076601 17 + TSS region transcription start site region 101160
Ifi47 11 49076587 to 49096974 20387 + protein coding gene interferon gamma inducible protein 47
Tssr107687 11 49081484 to 49081485 1 - TSS region transcription start site region 107687
Tssr101161 11 49086672 to 49086677 5 + TSS region transcription start site region 101161
Tssr101162 11 49086771 to 49086806 35 + TSS region transcription start site region 101162
Tssr101163 11 49086807 to 49086838 31 + TSS region transcription start site region 101163
Tssr101164 11 49086977 to 49086984 7 + TSS region transcription start site region 101164
Tssr101165 11 49087022 to 49087052 30 + TSS region transcription start site region 101165
Tssr101166 11 49087061 to 49087072 11 + TSS region transcription start site region 101166
Tssr107688 11 49087306 to 49087323 17 - TSS region transcription start site region 107688
Gm12188 11 49088234 to 49088543 309 - pseudogene predicted gene 12188
Cpgi2789 11 49088400 to 49088643 243 CpG island CpG island 2789
Tssr101167 11 49088723 to 49088727 4 + TSS region transcription start site region 101167
Tssr101168 11 49088906 to 49088913 7 + TSS region transcription start site region 101168
Tssr101169 11 49089583 to 49089605 22 + TSS region transcription start site region 101169
Tssr101170 11 49090179 to 49090212 33 + TSS region transcription start site region 101170
Tssr101171 11 49092950 to 49092955 5 + TSS region transcription start site region 101171
Tssr101172 11 49095851 to 49095865 14 + TSS region transcription start site region 101172
Tssr101173 11 49096706 to 49096735 29 + TSS region transcription start site region 101173
Tssr107689 11 49096965 to 49096977 12 - TSS region transcription start site region 107689
Tssr101174 11 49098774 to 49098804 30 + TSS region transcription start site region 101174
Olfr1396 11 49112777 to 49113757 980 - protein coding gene olfactory receptor 1396
Tssr107690 11 49119747 to 49119755 8 - TSS region transcription start site region 107690
Olfr1395 11 49148259 to 49149212 953 + protein coding gene olfactory receptor 1395
Olfr1394 11 49160016 to 49160954 938 + protein coding gene olfactory receptor 1394
Btnl9 11 49168325 to 49187089 18764 - protein coding gene butyrophilin-like 9
Cpgi2790 11 49169042 to 49169976 934 CpG island CpG island 2790
Tssr107691 11 49173751 to 49173783 32 - TSS region transcription start site region 107691
Tssr101175 11 49174615 to 49174616 1 + TSS region transcription start site region 101175
Tssr3483 11 49177097 to 49177103 6 + TSS region transcription start site region 3483
Cpgi2791 11 49180583 to 49180858 275 CpG island CpG island 2791
Tssr107692 11 49187052 to 49187076 24 - TSS region transcription start site region 107692
Tssr107693 11 49187079 to 49187088 9 - TSS region transcription start site region 107693
Tssr107694 11 49187092 to 49187105 13 - TSS region transcription start site region 107694
Tssr107695 11 49187110 to 49187124 14 - TSS region transcription start site region 107695
Tssr107696 11 49187135 to 49187146 11 - TSS region transcription start site region 107696
Tssr107697 11 49187168 to 49187195 27 - TSS region transcription start site region 107697
Tssr107698 11 49203207 to 49203231 24 - TSS region transcription start site region 107698
Cpgi2792 11 49203263 to 49203940 677 CpG island CpG island 2792
Tssr101176 11 49203285 to 49203298 13 + TSS region transcription start site region 101176
Zfp62 11 49203292 to 49218816 15524 + protein coding gene zinc finger protein 62
Tssr101177 11 49203314 to 49203344 30 + TSS region transcription start site region 101177
Tssr101178 11 49203465 to 49203524 59 + TSS region transcription start site region 101178