MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:48814190-48834739

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Trim41	11	48806404 to 48817353	10949	-	protein coding gene	tripartite motif-containing 41
Cpgi2779	11	48816298 to 48817700	1402		CpG island	CpG island 2779
Tssr107638	11	48816905 to 48816928	23	-	TSS region	transcription start site region 107638
Tssr107639	11	48816936 to 48816961	25	-	TSS region	transcription start site region 107639
Tssr101146	11	48817176 to 48817184	8	+	TSS region	transcription start site region 101146
Tssr107640	11	48817332 to 48817389	57	-	TSS region	transcription start site region 107640
Tssr101147	11	48817565 to 48817585	20	+	TSS region	transcription start site region 101147
n-TVcac7	11	48818542 to 48818614	72	+	tRNA gene	nuclear encoded tRNA valine 7 (anticodon CAC)
Cpgi2780	11	48821498 to 48821752	254		CpG island	CpG island 2780
n-TGacc1	11	48823728 to 48823801	73	+	tRNA gene	nuclear encoded tRNA glycine 1 (anticodon ACC)
Cpgi2781	11	48824190 to 48824739	549		CpG island	CpG island 2781
Gm12184	11	48825346 to 48826612	1266	-	protein coding gene	predicted gene 12184
Cpgi2782	11	48826055 to 48827066	1011		CpG island	CpG island 2782
Trim7	11	48826138 to 48850644	24506	+	protein coding gene	tripartite motif-containing 7
Tssr107641	11	48826301 to 48826323	22	-	TSS region	transcription start site region 107641
Tssr107642	11	48826724 to 48826747	23	-	TSS region	transcription start site region 107642
n-TKctt10	11	48833883 to 48833955	72	-	tRNA gene	nuclear encoded tRNA lysine 10 (anticodon CTT)
n-TAtgc9	11	48834429 to 48834500	71	-	tRNA gene	nuclear encoded tRNA alanine 9 (anticodon TGC)