MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:47468426-48508437

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sgcd	11	46971077 to 47988851	1017774	-	protein coding gene	sarcoglycan, delta (dystrophin-associated glycoprotein)
Gm12176	11	47541432 to 47542306	874	+	pseudogene	predicted gene 12176
D11Mit190	11	47781479 to 47781625	146		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 190
D11Mit191	11	47889093 to 47889238	145		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 191
Gm23039	11	47912385 to 47912545	160	-	snRNA gene	predicted gene, 23039
Tssr101135	11	47933917 to 47933921	4	+	TSS region	transcription start site region 101135
Tssr107627	11	47985152 to 47985176	24	-	TSS region	transcription start site region 107627
Cpgi2777	11	47988061 to 47989567	1506		CpG island	CpG island 2777
Tssr3481	11	47988426 to 47988437	11	-	TSS region	transcription start site region 3481
Tssr107628	11	47988962 to 47988980	18	-	TSS region	transcription start site region 107628
Tssr107629	11	47989386 to 47989409	23	-	TSS region	transcription start site region 107629
Cocia18	11	48117382 to 48117382	0		QTL	cocaine-induced activity, QTL 18
Gm12178	11	48289984 to 48290313	329	-	pseudogene	predicted gene 12178
Tssr107630	11	48349232 to 48349234	2	-	TSS region	transcription start site region 107630
Gm39818	11	48378300 to 48384324	6024	+	lncRNA gene	predicted gene, 39818
D11Mit176	11	48487712 to 48487835	123		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 176
D11Nds3	11	48487725 to 48487821	96		DNA segment	DNA segment, Chr 11, Nuffield Department of Surgery 3