Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:47329386-48649409

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sgcd 11 46971077 to 47988851 1017774 - protein coding gene sarcoglycan, delta (dystrophin-associated glycoprotein)
Tssr107622 11 47379278 to 47379297 19 - TSS region transcription start site region 107622
Tssr107623 11 47379306 to 47379344 38 - TSS region transcription start site region 107623
Tssr107624 11 47379352 to 47379368 16 - TSS region transcription start site region 107624
Tssr107625 11 47379374 to 47379395 21 - TSS region transcription start site region 107625
Tssr107626 11 47379405 to 47379414 9 - TSS region transcription start site region 107626
Gm46256 11 47422101 to 47425504 3403 + pseudogene predicted gene, 46256
D11Mit239 11 47450141 to 47450429 288 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 239
Gm12176 11 47541432 to 47542306 874 + pseudogene predicted gene 12176
D11Mit190 11 47781479 to 47781625 146 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 190
D11Mit191 11 47889093 to 47889238 145 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 191
Gm23039 11 47912385 to 47912545 160 - snRNA gene predicted gene, 23039
Tssr101135 11 47933917 to 47933921 4 + TSS region transcription start site region 101135
Tssr107627 11 47985152 to 47985176 24 - TSS region transcription start site region 107627
Cpgi2777 11 47988061 to 47989567 1506 CpG island CpG island 2777
Tssr3481 11 47988426 to 47988437 11 - TSS region transcription start site region 3481
Tssr107628 11 47988962 to 47988980 18 - TSS region transcription start site region 107628
Tssr107629 11 47989386 to 47989409 23 - TSS region transcription start site region 107629
Cocia18 11 48117382 to 48117382 0 QTL cocaine-induced activity, QTL 18
Gm12178 11 48289984 to 48290313 329 - pseudogene predicted gene 12178
Tssr107630 11 48349232 to 48349234 2 - TSS region transcription start site region 107630
Gm39818 11 48378300 to 48384324 6024 + lncRNA gene predicted gene, 39818
D11Mit176 11 48487712 to 48487835 123 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 176
D11Nds3 11 48487725 to 48487821 96 DNA segment DNA segment, Chr 11, Nuffield Department of Surgery 3
Gm12179 11 48551253 to 48552524 1271 - pseudogene predicted gene 12179
Gm12180 11 48568355 to 48569015 660 + pseudogene predicted gene 12180
Gm12181 11 48595279 to 48595809 530 + pseudogene predicted gene 12181